| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42547 |
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| Symbol | |
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| ID | 7196253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 382658 |
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| End bp | 385206 |
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| Gene Length | 2549 bp |
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| Protein Length | 788 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176573 |
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| Protein GI | 219109637 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.290154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAGCGTTGTA GGAATACGAG TCGCTATCCA CACGATCGCC GCTTCGTTAG AGCATATCGA
CATCCTCTTG TTCTCTCTGG AAATAGGTTT GTCTTGTTCC CTTTACGTGT TTTCGGTTGC
GCGATATCAT AAAAATGGGG TTGGGCTTTG AGAAGACTGG TTCTCGTTCG CTCTTGCCGG
ACCAGGATCG TCGACGTAGG GCTCCCGAAC AAAGCGTATG GTTGCAATGG GCATTTCCTG
CCTCGCTGGC AGTCGTAGCC CTAATCATTG GCCTTTCTGT TTGGTCGAAT CCAAACGACC
CGGTCTTGCA ATTGTCCCCG TATACCTACC GCGTCTTTGG CCCCGCCAAC GACGTCGTTA
CCGAGACTTC CCATGGGGAC ATTTCCTTTC ACTTTTACAC GCCATCGCAA CAGCGCGACT
TGTTGATTCA GTACGGTCCC AAGTGTCAGC AAGAGTTACA GATCCCCGTT GATCAGGAAA
GCGACAATAT TCTGCTGAAA CGTTTTGATG AATTGCCTCC GCATTTCGCC GTGGAACTTT
GGAAGTACTG CATGTTGTAC ACGGGTGTCG GGAACCTCTA CTGGGAACCG AACAACGCCA
AGCCTTGGAT TTCGTGGGAC GAATGGCTGC CGTCGGTCAC GACTCTCGGA GGTGACCGTA
CGCGTACGTC GTCTTTGGCC CTGCGCGTGG AAGACAGTGC TACCGATACG GTCATCCCCA
AAGAGATGAA CGGGCATTTG CAAATTCTTC ATTCGCTCCT GTACTTGGCT CATCCCCAAT
CTCGGTTGGC TGCGGATATG ATGCGCATTT TGCTGCACAC TAATGTAGCG AATCTAGATC
CAGTGCAAAT GGCCGAGACA CTGGGCTTGT ACATTGAACA CGAACCCGAG AAGTGGACCC
TCATAACGGC TCGGTGCGTC TTTCTGGAAA CCACCACACC TTTAAACGTG ATGGTAGAAG
ACAAAATTCC CTCCAAGGGA GCAATTCCAA AGTCCAGACG GTTGGTAAAG GCCACCAATA
CCATGACGGC AGATGCATTA CCGCAGCGTC ACTGCCCAGC TTCCCACGGA GGGTATTGTT
GTCAAGTCTG GCAGCCCGGA ACTGACTGGC CCATCATGGC AATTCATCGG CCGTACATTG
CCGTCAAAGA CATTGATATA CCATTGCCGT ACATGGTGGC AATCAATGGT CAGACGCTGG
ACGATGTCGG TGAGAAAGAT TTGGCTTTGA GTAATTCCGA CGTCCCTTAC ATTGCCACAG
TGACGTCCGT ATCGACTAGC TTACCTCCGG TCTCCAACCA CGAAACGCCC AATTTTTTTG
ACATTTTAAT GGAAAACTCT TGTCTTCCAG GAACACGAGA GTGTTTCCGC TGTCTCAAGC
TTGGCTTTCA TGGTGAACCC GGTGGTGGCT CGTGTGAAGC TTGCCAAAGC GTTTGTCAGT
GCTTTTGCAA AGTACTGTGC AAGGTTCGCC CCCCTCCCAA ACGTATTTCT GCCGAGTGGA
CCGTTCGACG CCCCGTGCAG CGCAAAGATC CATCACGTCA CATTCCGCGG GAAATTCACC
AGACCTGGTT CGAGCCCATT ACACAAGAAT CTTACCCCAA CATGAGTCGG TTGATTGAAT
CGTTTCGACA AGCTGGATGG ACTTACCATT TCTACGACGA TGAACTCTCT GCGCAGTTTC
TTTCCGCTCA TTTCCCACCC GAAGTTCGCG AAGCCTACGA TTCTATCACC CCCGGAGCGT
TCAAAGCCGA TCTATTTCGA TACTGTGTCT TATTGATTCG TGGAGGTTTA TATGTGGATA
TGGATATTCT CCTCGAATCG AATCTGGATA ATGTAATCCC GCCCGAAATT GGTTTTATGA
CTCCTCAGGA TGAACCCGGT TCATCCATAG ATGCCCGCAG CTGTCTCTGG AACGGATTCT
TGGCTTCTGC TCCAGGACAT CCGTTTTTGG CCCGGACAAT CCAAAACGTT GTGAACAACA
TCCGCAACCG CTTCACTTCT GTTGATTACG ACGACATGTT GTGTCCGGAC CCGGTTTTGT
CAGTTGCACA TTCTGTCGAT GTTTTGTTTA CTTGTGGGCC ATGCATCCTC GGATCCTCTA
TAAACGAAGT GTTGGGAAAG CATCCACAAG CAAATTTTGA GTACGGTGAT ATTGATCTGT
ATGGGGTTGA ACGTGAGAAG GCAGGGCAAT ACAAGGATGA AAATCCTATG TCCAGCAATC
ACCGCAAGCT CGTGGTGGAT CCAGATGATC ACAGACTACT GATCCCAGGT CGTAGCATCC
TGTTACGGCA AAACAAGAAC GATATGGGCG CTCATCGGTT TACTTGGGAC CAGCACAACA
CTGTTGTTGC GACAACGGAT CTGCCTGACT ACGATGACCG TCCGAAATCG AAGGGCCACT
ACTCCGATAC GCACGAACAA TTTGGTATTT ACGGTTTACA CAAACTCTAC GTGGATGAAA
AACGCGCCAA CGAAGTCATC AAAATCACTG TCCAGGCGTG AAGAAATTGT CGTAGAAATT
TTAACAATAG CTGGGCAACT TTACGCAAT
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| Protein sequence | MGLGFEKTGS RSLLPDQDRR RRAPEQSVWL QWAFPASLAV VALIIGLSVW SNPNDPVLQL
SPYTYRVFGP ANDVVTETSH GDISFHFYTP SQQRDLLIQY GPKCQQELQI PVDQESDNIL
LKRFDELPPH FAVELWKYCM LYTGVGNLYW EPNNAKPWIS WDEWLPSVTT LGGDRTRTSS
LALRVEDSAT DTVIPKEMNG HLQILHSLLY LAHPQSRLAA DMMRILLHTN VANLDPVQMA
ETLGLYIEHE PEKWTLITAR CVFLETTTPL NVMVEDKIPS KGAIPKSRRL VKATNTMTAD
ALPQRHCPAS HGGYCCQVWQ PGTDWPIMAI HRPYIAVKDI DIPLPYMVAI NGQTLDDVGE
KDLALSNSDV PYIATVTSVS TSLPPVSNHE TPNFFDILME NSCLPGTREC FRCLKLGFHG
EPGGGSCEAC QSVCQCFCKV LCKVRPPPKR ISAEWTVRRP VQRKDPSRHI PREIHQTWFE
PITQESYPNM SRLIESFRQA GWTYHFYDDE LSAQFLSAHF PPEVREAYDS ITPGAFKADL
FRYCVLLIRG GLYVDMDILL ESNLDNVIPP EIGFMTPQDE PGSSIDARSC LWNGFLASAP
GHPFLARTIQ NVVNNIRNRF TSVDYDDMLC PDPVLSVAHS VDVLFTCGPC ILGSSINEVL
GKHPQANFEY GDIDLYGVER EKAGQYKDEN PMSSNHRKLV VDPDDHRLLI PGRSILLRQN
KNDMGAHRFT WDQHNTVVAT TDLPDYDDRP KSKGHYSDTH EQFGIYGLHK LYVDEKRANE
VIKITVQA
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