Gene PHATRDRAFT_42423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42423 
SymboldsCYC9 
ID7196635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp17244 
End bp18223 
Gene Length980 bp 
Protein Length320 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176503 
Protein GI219109497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.126266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGCCGGAGCG ACCGACGATG GTGGCCTTGT CGATAGCAAC GACTCCTTTG GAGGATGCTA 
TGCTCCATCA TATAGACGTT GACGAAATAT CAGATCGTGT TGCAATCATG AGAATCCAAG
AAGATACCAC CTACAGAGTC AAAGATTATC TTGCGGAAAG TACGGGGATA CGTAAGCTCG
CAAGTAAGCC TGTCGACGAA GACTGCCGTG TTAAGATGTG TGAGTGGTGC TATCAAGTCG
TTGACTTTTG CAAATTCCGG AGAGAAACTG TTGGAATCGG GATGTCCTAT CTCGATCGTT
ATCTTTGCAC TCCAAAAGGA AAGGAGGCGT TATGCAACCG AAAGGAGTAT CAGCTCGCTG
CCATGACTGC TCTATACATA GCGATCAAAA TACACGAGCC TCTGGAAATG GAAACATCGC
TGCTGGCTGA TCTAAGTAGG GGATGTTATA CCGAAATGGA ATTTGTACAT ATGGAACAAA
CCATACTCCA AGCTTTAAAG TGGCGTGTCA ACGGGCCTAC GCTACTCGGC TTCGTGGCAC
ATTTTGTTGC GCTCCTCCCA GAATCGGTTC ATCCTGCCAT TGCCGAAACG ATTTTTGATT
ACGCAAGATA TCAAACCGAG ATAGCAATTG CTGAGCACGT ACTTGTCAGT ATCAAGCCAT
CAGAGGTCGC TCTTGCCGCC GTCCTCAACG CAATTGAAGG AATGGACGTT GCTTTGCTCC
CGCTGAAGGT GCAAGGTAAA TTTGTTCGGA ATATAGAACG CTTTTCCGAG ATTTTCATCG
ACGATGTTGA ACACATTCAA TCCCATCTAA GTCTTGCACT TGCAAGTCTA CTTTCTGGTG
ACGTTTCCGA GATCATTGCC GCAGTCACCG ACATTGAAAG TGAGGACGAA TACGTCGATG
ACAAGTCAAT CACTGCGTAC AATCGACGGA ATAGTCCCGT ATCTGTTGTG CAGCGAAATC
GACAGACAAG CGTTGTCTAG
 
Protein sequence
MVALSIATTP LEDAMLHHID VDEISDRVAI MRIQEDTTYR VKDYLAESTG IRKLASKPVD 
EDCRVKMCEW CYQVVDFCKF RRETVGIGMS YLDRYLCTPK GKEALCNRKE YQLAAMTALY
IAIKIHEPLE METSLLADLS RGCYTEMEFV HMEQTILQAL KWRVNGPTLL GFVAHFVALL
PESVHPAIAE TIFDYARYQT EIAIAEHVLV SIKPSEVALA AVLNAIEGMD VALLPLKVQG
KFVRNIERFS EIFIDDVEHI QSHLSLALAS LLSGDVSEII AAVTDIESED EYVDDKSITA
YNRRNSPVSV VQRNRQTSVV