Gene PHATRDRAFT_41702 details

Gene Information

• Locus tag: PHATRDRAFT_41702
• ID: 7196707
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 1944523
• End bp: 1946669
• Gene Length: 2147 bp
• Protein Length: 671 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002176877
• Protein GI: 219110251

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCGTG GTGTTGGTGG ACGTATCGAG GATGCCTTTG CGGCCGCGAA GGAACAGGGC 
GAAGCGGCCT TTGTGACGTT TGTCACCGCC GGTTATCCGA CTGCTGCTGG TATGTACACC 
AGCCGATTCT ATTCTGCTTT ATCAATTTTA TGTTTCCTCA AACTCCTCTG CTTTTGACTT 
ACTCAGATAC GCCAGCGATT CTCATGGCCA TGCAGGAAGG TGGGGCGGCG TTGATTGAAC 
TTGGAATTCC GTACACAGAT CCGCAGGCCG ACGGAGCTAC GATCCAGCAC ACCAATCAAG 
TAGCAATCAA GGGAGGGACG TCGGAGATTC ACCAGTGTCT CGACATGGTA AAGAAATCTC 
GCGAAATGGG ATTAACTGTG CCCGTGGTTC TCATGGGATA CTACAACCCC TTCCTTCAGT 
ACGATGTAGA CAAGCTTTGC GAAGAAACCA AGGCTGCCGG AGCCGATGGT TTCATCGTTG 
TCGATCTTCC TCCCGAAGAG GGTATTGCCT TGAATAAGGC TTGCATTGCC AATGGGCTTT 
CCAATATTCC CTTGGTAGCA CCTACTTCGA GTGACAAGCG TATTGCTTCC TTGACAGACA 
TGGCTTCTAC CTTTCTATAC TGCGTATCAG TTACAGGAGT AACTGGCGCG CGTGAATCCC 
TTCCTCCGGA TCTGGAGGAG TTCATTACAC GCGTACGTTC CAAGACGGAA CTACCTTTAG 
CGGTCGGTTT CGGTATTTCA AATCCTGAAA TGGTAAATGG TGTTGCCAAC ATGGCCGATG 
GTGTTGTGGT GGGTAGTGCG ATTTTGAAGG CTATGGATTC GCTTGGAGAC ACTGCTACCA 
CCGAACAGCG TGCCGATGCA ATTCGTGAGG TTGTGGCTCA CTTGAAAACA GGTACGAAAC 
AGTCGGGCGA TGCAAAGAAC CAGTCAACTA AACTTGGTCA AATCCCAGCG GAATGGACTC 
TGGGCGAGAA CAACAGCCGA TTCGGGAAGT TTGGCGGGCA GTACATTCCA GAAACCCTTT 
CGGTCGCCTT CGAAGAAATT GAAGCGTCCT ACAATGAGCT GAAGGACGAC CCATCCTTCC 
TTGCTGAACT CGACGAATAC CGACGGGACT TTGTTGGTGG TCCGACGCCT TTACACAGAG 
CGGACCGCCT GACGGAACTT GCCGGAGGCG CGACGATCTG GTTAAAGCGC GAAGACTTGG 
CACATACGGG AGCTCACAAG ATCAACAATG CAATTGGGCA AGCCTTGCTT GCCAAGCGAA 
TTGGAAAACC GCGTATCATT GCCGAAACGG GTGCTGGACA ACATGGAGTC GCCACTGCAA 
CAATTTGCGC CAAGCTCGGC CTCGATTGCA CTGTCTACAT GGGAGCGGTT GATTGTGAGC 
GTCAAAAGCT TAACGTTTTC CGCATGAACA CTCTCGGTGC CAAGGTGGTA CCTGTACAAG 
ATGGGCAACG GACTTTAAAG GATGCCATCA ACGAAGCGAT GCGCGATTGG GTCACCAACG 
TTCGCGATAC GCATTACTTG ATTGGTTCCG CTGTCGGGCC TCATCCATTC CCAACGATTG 
TACGTGACTT TCAAAGCGTA ATGGGTCGCG AGATGCGTGC CCAGATGCTT GAAAGGGCCG 
GAAAGCTTCC AGACGCTGTT GTGGCGTGTG TCGGGGGTGG ATCGAATGCC ATAGGAGCTT 
TCCATCCTTT CGTTAATGAC GAGACTGTTG AGCTTCACGG AGTGGAAGCG GCAGGCTACG 
GGATCGACAA AGACGAAGAA CATTGCGCGA CTCTCACCAA GGGAACACCC GGGGTACTCC 
AGGGAGCCAT GACATACGTT ATTCAGCAAA AGTCCGGTCA AACGCTCAAC ACACACTCAA 
TCTCTGCGGG TCTTGACTAT CCAGGTGTTG GTCCGGAGCA CGCTTTCTTG AAAGATAGTG 
GACGAGCTGT ATACGAGGCA GTCACAGATG ATGAAGCACT GGAGGGCTTT AAATTGATGT 
GTGAATATGA AGGTATCATC CCGGCCCTTG AAACGAGCCA TGCTATCTAC TATGCGGTCA 
AGCTCGCGAA AAAGCTCGGC CCTGGCAAGG ACATTGTAAT CAACATGAGT GGTCGGGGAG 
ACAAGGACAT GCCGCAGATC GCGAAGATTA TGGGCGTCGA AGTTTAA 

 

Protein sequence

MERGVGGRIE DAFAAAKEQG EAAFVTFVTA GYPTAADTPA ILMAMQEGGA ALIELGIPYT 
DPQADGATIQ HTNQVAIKGG TSEIHQCLDM VKKSREMGLT VPVVLMGYYN PFLQYDVDKL 
CEETKAAGAD GFIVVDLPPE EGIALNKACI ANGLSNIPLV APTSSDKRIA SLTDMASTFL 
YCVSVTGVTG ARESLPPDLE EFITRVRSKT ELPLAVGFGI SNPEMVNGVA NMADGVVVGS 
AILKAMDSLG DTATTEQRAD AIRESTKLGQ IPAEWTLGEN NSRFGKFGGQ YIPETLSVAF 
EEIEASYNEL KDDPSFLAEL DEYRRDFVGG PTPLHRADRL TELAGGATIW LKREDLAHTG 
AHKINNAIGQ ALLAKRIGKP RIIAETGAGQ HGVATATICA KLGLDCTVYM GAVDCERQKL 
NVFRMNTLGA KVVPVQDGQR TLKDAINEAM RDWVTNVRDT HYLIGSAVGP HPFPTIVRDF 
QSVMGREMRA QMLERAGKLP DAVVACVGGG SNAIGAFHPF VNDETVELHG VEAAGYGIDK 
DEEHCATLTK GTPGVLQGAM TYVIQQKSGQ TLNTHSISAG LDYPGVGPEH AFLKDSGRAV 
YEAVTDDEAL EGFKLMCEYE GIIPALETSH AIYYAVKLAK KLGPGKDIVI NMSGRGDKDM 
PQIAKIMGVE V