Gene PHATRDRAFT_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_3171 
Symbol 
ID7195994 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand- 
Start bp652286 
End bp653034 
Gene Length749 bp 
Protein Length220 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177133 
Protein GI219110763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.248181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCATTGGCGA AACCTGCACA CGAGAAGCTT TTGCCGGATT GGTCACAGGT ATGGATGGAA 
CTGCGAGACT AATCTAGTCC AATTTCGGCG TTTTGTTTTC ACTGTATCTT ACTTTGTACG 
GTTTGCCTGT CCCGCAGCTT CCCAATGTTC CTCAGGATAT TCCCGTTCCC CACACACTTG 
TTCTCGACTT GGAAAATACA CTTGTTTCCT CCACTTGGGA TCGTCGCTAC GGCTGGCGGC 
ACGCGAAACG CCCCGGTGTC GACAAATTTC TACGCGAACT GGCACAGTAT TATGAAATTG 
TTCTGTACAG CCCTAGTATT GATGGTATTG CGGACCCTGT CGTCACCTCC TTGGATAAGG 
ATGGGTGTAT TATGCACAGA CTGTATCGCG AGGCGACCTA CTACACCGGT GGCGTGCATG 
TGAAGGATTT GAATCGTTTG AACCGTCCCC TGAATCGTAT GGTTGTGATT GACGATGATC 
CCTCGGAGGT CCAATTCAAC CCTGAAAACT TGATTCGCGT CAAGCCGTAC GCGGACCCGA 
CGGATCGCAC GGACAACACT TTAGAACGAA TCCTCCCATT TTTGGTAGAG ATTGCTCGTG 
AAGGATACAA TGACGTCCCG GGGCTGTTGC GACAATACGA AGGCATGGAT GCCGATCAAA 
TTGCCGATGA GCAGGACCGC CGCATCCACG AACTACGCAC TCACCGTGAA CGCCGCTCGC 
AACAGGGATT AGGAGCTTTG GCTCGTGGA
 
Protein sequence
PLAKPAHEKL LPDWSQLPNV PQDIPVPHTL VLDLENTLVS STWDRRYGWR HAKRPGVDKF 
LRELAQYYEI VLYSPSIDGI ADPVVTSLDK DGCIMHRLYR EATYYTGGVH VKDLNRLNRP 
LNRMVVIDDD PSEVQFNPEN LIRVKPYADP TDRTDNTLER ILPFLVEIAR EGYNDVPGLL 
RQYEGMDADQ IADEQDRRIH ELRTHRERRS QQGLGALARG