| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_24772 |
|---|
| Symbol | |
|---|
| ID | 7196176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 1492602 |
|---|
| End bp | 1495320 |
|---|
| Gene Length | 2719 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177302 |
|---|
| Protein GI | 219111101 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GGATTTGCAA GCATACAAGA GAAGATAAGC ACAATGAGGT TTAGTGGATC GTTACCGTTC
TGCCTGCTTT TAGCGAATAC CGTGGCCTTT GTACCCAATG CTCGGAATGC GGCATTCCGC
CCGGTTCCAT CGAGTCTATT TGCGGCTGGG CCCCGAACTC TTTACGACAA AATTTGGGAT
GATCATATGG TCGACGACGA TGGTAGCTCT TTTCTAATCT ACGTCGACCG CCATTTGGTG
CATGAAGTTA CGTCTCCGCA GGCTTTTGAG GGCCTTCGTT TAGCAAAACG TGGAGTTCGT
CGCCCGGACT GCACGTTGGT CACAGTCGAC CACAATGTCC CTACGGCCGA TCGTACCGGT
CTCATTGACG TTGCTACTTT TATTGAAGAG ACTGCGAGTC GTACGCAAGT TATGACGCTT
GAACAGAATA TTAAGGACTT TGGTCTCAAA TATTTCTCCT TTGCGGACGA GCGGCAAGGA
ATAGTTCATA TTATTGGTCC TGAACAAGGA TTTACTTTAC CAGGGTGTGT GACTGTTTGC
GGAGACTCGC ATACCGCAAC TCACGGCGCA TTCGGTGCTT TAGCGTTTGG AATTGGAACC
AGCGAAGTAG AGCACGTTCT CGCTACTCAG GTACGATAGT TTTGCATGTG CTCTGACTTT
ATCTACGTCA CTTATTGTGC TCTCATCCAT GTTTCGCCTA CTCTTTGCCA CAGACTCTTG
CACAGACCAA GACGAAAAAC ATGCTTATCC GTGTCGACGG AGAGCTTGGT GACGGTGTCA
CATCCAAGGA CATTATTCTT CATATCATTG GAGTTATTGG AACTGGCGGG GGTACTGGAT
ACACCATAGA GTTTGGAGGT ACAGCTGTTC AGAGTTGCTC TATGGAGGCG CGTATGTCGA
TTTCAAACAT GGCCATTGAA GCTGGAGCGC GCGCTGGCAT CATTGCTCCC GACGATACAA
CCTACGAATA TTTAAAGGGA CGCCCGATGT GCCCATCTGG CGAAGAATGG GAGAAGGCTG
TCAAATATTG GGACTCAATC CGGTCTGACG AAGGTGCTGT CTACGACAAA ACTATTGTTA
TTGATTCGAA AGATATCGCT CCCACCGTTA CGTGGGGCAC CAGTCCGCAG GACGTTGCTC
CCATTACCGG AAATGTTCCG ATGATTCAGG CGGAAGGACA TGATGCTTCT CGGCAGGTAA
GACCACTGCG GCTTTTGAAA AGGTCGATGA CCGGCTTCCT CTCACATTTT GCCACCCTCT
ATACAGAATG CTATCAAGCG ATCCTTGCAA TACATTGGGC TTGAAGAAGG TCAGCCTCTC
GAGGGTGTCC CGATTGAAAA GGTTTTTATC GGTTCTTGTA CCAATGGTCG TATTGAGGAT
ATTCGTAACG TTGCAGCCAT TGCCATGGGA CGCAAAGTTG CCGAAGGCGT TGATGCCATG
GTCGTTCCAG GATCTGGTTT AGTCAAAAAG CAAGCGGAAG AGGAAGGTCT TGACAAGATT
CTCATCGAAG CCGGCTTTGA CTGGCGTGAA CCTGGATGCA GTATGTGTTT AGCCATGAAC
CCAGACAAAC TCAAACCTCA AGAGCGCTGC GCTTCTACTT CCAATCGCAA CTTCGAAGGC
CGGCAAGGAA ATGGCGGAAG GACTCACTTG ATGTCGCCTG GAATGGCCGC TGCTGCTGCT
GTTAGCGGAG TTATTTCTGA CGTTCGAAAA TTCCCGTTTC TTGGCGATCC GTCGGCCGAC
CCTCGTTTGG CTTCCAACTC CAAGAGTCGC GTCTTTACTA CCGAAGAGCT TGTATCTCCT
GGTCCAGTTA TTTCGCCCCC GGCTCCATAC CTCGAGAATC TAGATGCTGA AATCAAAGGC
ACAGCCGATA GTGCTGGCCT TCCCAAATTT AACTCGCTGA CGGGTGTTGC GGCTCCTCTC
GATATTCAGA ACATTGATAC CGATATGATC ATTCCTAAGG AATTTCTCAA GACTATTAAG
CGTTCCGGTC TTGGATTTGC TGCTTTTGCT GAACTTCGGT ACGAAAATGC TGAAGAAGTT
GCCACGATTG GAGAAGAAGT TGCAAAACTT CGTGACGACT TCATTTTGAA CAAGAAGGGA
TACGAAAGCA CGAAGATTCT CATAGCTGGT GATAACTTTG GATGTGGATC AAGTCGAGAA
CACGCTCCGT GGTCCATCAA CGACATGGGA ATTCGCTGCA TTATCAGCAC TTCTTTTGCC
GACATTTTCT ATAACAACTG CTTCAACAAT GGTATGCTTC CAGTGACACT TCCACGTGAT
CAAGTGGAGT TTCTGCTCGA GGATGCTGGT ACTCCGGGAA CAGAGATCAC GGTCGATTTG
ATCAACCAAA AGGTCGTCTG TGCCAATGGT GACGAGTTTT CGTTTGAAAT TGATGAGTTT
CGAAAGGATT GCTTGGTCAA CGGATTGGAT AAGATCGGGT TGACGCTCGC CAAAGATGAG
AAAATTTCCT TGTTCGAGAC GTCTCGTTCT GCTCAGTTTC CGTGGCTCGA TGGTGCCTCA
TTCAAGGTTC CCGATGTTGT CCCTATGTAC CCTGATGCCG GATTCTGGAA ACGGGAAGGT
GTGGTGGCCT AGTGCAGAGG AAGAGTAGCA AAGCTGATAA TTTTCGCAAA TGCGTTGACG
CCGACGGCCT TCAAATTTCT TGCTCTGCGG TAAATCAATA TAGTTTACAG TTAAGGTAAA
AAAGGGAGAA ACCGATACC
|
|---|
| Protein sequence | MRFSGSLPFC LLLANTVAFV PNARNAAFRP VPSSLFAAGP RTLYDKIWDD HMVDDDGSSF
LIYVDRHLVH EVTSPQAFEG LRLAKRGVRR PDCTLVTVDH NVPTADRTGL IDVATFIEET
ASRTQVMTLE QNIKDFGLKY FSFADERQGI VHIIGPEQGF TLPGCVTVCG DSHTATHGAF
GALAFGIGTS EVEHVLATQT LAQTKTKNML IRVDGELGDG VTSKDIILHI IGVIGTGGGT
GYTIEFGGTA VQSCSMEARM SISNMAIEAG ARAGIIAPDD TTYEYLKGRP MCPSGEEWEK
AVKYWDSIRS DEGAVYDKTI VIDSKDIAPT VTWGTSPQDV APITGNVPMI QAEGHDASRQ
NAIKRSLQYI GLEEGQPLEG VPIEKVFIGS CTNGRIEDIR NVAAIAMGRK VAEGVDAMVV
PGSGLVKKQA EEEGLDKILI EAGFDWREPG CSMCLAMNPD KLKPQERCAS TSNRNFEGRQ
GNGGRTHLMS PGMAAAAAVS GVISDVRKFP FLGDPSADPR LASNSKSRVF TTEELVSPGP
VISPPAPYLE NLDAEIKGTA DSAGLPKFNS LTGVAAPLDI QNIDTDMIIP KEFLKTIKRS
GLGFAAFAEL RYENAEEVAT IGEEVAKLRD DFILNKKGYE STKILIAGDN FGCGSSREHA
PWSINDMGIR CIISTSFADI FYNNCFNNGM LPVTLPRDQV EFLLEDAGTP GTEITVDLIN
QKVVCANGDE FSFEIDEFRK DCLVNGLDKI GLTLAKDEKI SLFETSRSAQ FPWLDGASFK
VPDVVPMYPD AGFWKREGVV A
|
|---|
| |