Gene PHATRDRAFT_24514 details

Gene Information

• Locus tag: PHATRDRAFT_24514
• ID: 7196013
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 740874
• End bp: 745203
• Gene Length: 4330 bp
• Protein Length: 326 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002177152
• Protein GI: 219110801

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.63338
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCAACACGAA GCCATTGACT TTGAAGACAG TTAAAATAGA GGCATTGGCT GTGAACACTG 
TCACTTACCA ACGATATAGT GCGACTGTAG ATTGGCTCGC ACAGCGACCA AGAGTGGGGT 
GGCGTTCAAC ATGAGTATAA AAACTCTCTG GAGAGGATTG CGTCCGGGAT TGAGGTACAT 
TGAGCCCTCT TCGTCTCTAT GTTCGACCGC TTTCTTTTCT ACAAACGCTA CTGATGAAAC 
GTTCTGGCAT GTCAAGCGTA CTCCAATCAT TGCGTACCCT CAATCGGCCA CCAAAAAAGT 
TCCTTCACAT ATTGTGCGTC CGCCATACGC CGATTCCGGT ATACTTCCTG TGAGCCGCTA 
TGGCGATGAC ATTGTGTTGC ACGACAAAGT TTCGCTAAAG CGAATGACTG ATGCGGCCCG 
TTTGGCCCGA AGTGTTTTGG ATTTAGCATG CTCTCTCGCG AAACCGGGGG TTACAACTGA 
TGAGATTGAT ACTGCCGTCC ACGAAGCAAT CGTGGAAGCG AATGCCTACC CGAGCCCACT 
GAATTACTGT TGGTTTCCAA AGTCTTTGTG CTCGTCTGTG AATGAGGTAA TTTGCCACGG 
TATTCCAGAT TATAGGCCTC TGCAGTTCGG TGACATAGTC TCTTTTGATG TCAGTTGCTT 
TTTGAATGGA GTTCACGGCG ATAACTGTGC AACTGTTATT GTAGGGGATA GTCAAGAGAA 
AGACGAAGGC GGTGGCGTCG ATTGGCGTGG TGTACCGTAT CGAATGCAAT TTGACAAGAA 
GGACGACGAG TCGCATTTTT TGGATGCGCG CCGATTAGTA CAGGCAGCAC GGGAGAGTCT 
CTATGCCGGC ATAGAAACGT GCAAACCGGG TAGCTGTCTT TCTAGCGTTG GCTCAGCCAT 
TCAAGACGTG GCCGAATCCT ACGGATTAAG CTCAGTCGAA AAGTATCGCG GCCATGGTAT 
TGCGGATGAA TTCCATATCG CCCCATACGT CAAACATTAT CGAAACACTG ACAAGGTTGT 
TTTAAAACCC GGAATGATTT TTACTATTGA ACCAATGTTG ACCAATGGCG CTTCTACGTG 
CTACGAATGG GACGACGATT GGACTGTTGC TACCGCTGAT GGAAGCCTAG CTGCCCAATT 
TGAACATACT ATACACATTA CCGAAAATGG CGTGGAAATT CTAACTCTTC CCGAGTAATA 
TTAACAGTAA GGGGATGCGT TGTTATTAAC CAAGAGGAGC ACCGATTCGT TGGATATAGC 
AGCATCACAA AGGTTGGACA GCGACGACAC CTAAACGAAT TCCTGCCTCA TCTCAATCGA 
AAAGCATTCG ATGACGTCTC CTGTTTGGTA GTTGTCAAAG CCGTCCAGCG ATAGCCCACA 
ATCTTTCCCA TTCGATAGTT CATTAACGTC ATTTTTGAAG TGCTTCAAAC TAGTCGCTCC 
AAGTGCGTCC ATAGGAGTAA GGGGCTTACC GTCGCGAAAG ACGCGATACT TGGCCTCCAG 
TTGGCCATTC TTTCCTTTGC ACTTCTCTCT ATAAAAAATC CCTTCTGAAA TGTTTAGACC 
AGCGACTCGA TTTTCGATAC CTCCGATGTC AAAAACGGCC TGGACTTTTC CTCGACCATG 
AACAATCTCG AATGGGGTAC ATGGGAAATG CTTAACAAAT TCATTCTTCG CGTCTTCAAG 
CAGTCGGTAA ATGACGTCAT TTGAAACCAA TGATATGCCT TCACTCTCAG CCATGCTAGC 
AATCGTTTGT TCATTTTTCA AATTGAAGCA AAAAATTGAG GCACCACATT CCTTGGCCAT 
TTCGATATCC GTGGCATGAA GTGGGCCCAC TCCCACCTTT ATGGGGTCGA TGCAGACATT 
TAATGTAGAT TCATCAGCAA TAGCGACAAG AGAGTCCCGA ATTGCGTCCA AAGTACCGTC 
GGCGTCGGCG CGCAAGATGA CTGGGATGCG AATTTGCGAT TCGTCCTCGC CTTCCAGTCC 
ATGTTTCTCT TCAAAGGCTT CCCGCCATCG AAAGTTCATA AGGTGCTTCC CTGCACTTTG 
TATTTCTGCA TCATTTTTGT TTTGCGTCAC GGATTCTGTT TTGGCAGATA AAGCAGCTTG 
CCGACTCGCA ATAAGCTGAT CTGCTGCTTC CTCGGATGCT ACACAGACTA TGGGCTCACC 
GGCTTTTGGC ACAGTATCGA AACCGATTAT TCGGACTGGC TGTGATGGTA CGCCTCTCAA 
AAGTTGTTTG TTGCTTACAT CCTTGAGAAG TCTCACTTTC CCTGTGTTTG TGCCACTGAC 
AACTATGTTG CCTTTTTCCA AAGAACCCCA TCGAATGATA CAATCAGCAA CAATGCCCAG 
ACCTTTGTCG ACTTTTGCAT CCATGATGAT GCCTTCGCAA CGCGTAGAAT CGTCGGCCCT 
AAGATCCATC ACCTCACTCT GTAAAACCAA GCCTTCAATT AAATCGTCTA ATCCTTGTCC 
CGTAAGCCCA GAAACCGGTA CAAGCTGAAC AGGAGGACCA TATTCCCCAT CCTGATCAGA 
AGGCATACCC TCCGTTAGGA TACCATGTTC CAATAATTGA CTCTCAATTC GCATGCGAGC 
CTCGTCTACT TCGATTCCGG GTTTGTCGAT CTTGTTCATT GCAATGACTA ACGATATTCC 
AGAACCACCT GAGCTAGTAA TGATTGACTT GTAAAAATCC AAAATCTCAA CAGTTTGTTC 
GGATACTCCA TCATCTGCTG CAATCACCAA AACAAGGATA TCAGCCGCAT CGGAACCTGA 
CTGCCTCATT GTTTTAAAGG CAGCATGGCC CGGTGTGTCT AAAAATGTAA CAGCGCCGAC 
AGCATGATCC AATAAGGGTA CTTGAAAAGC GCTGATTACT TGCGTGATAC CCCCCGCCTC 
TGTCCCAGCA ACGTCTCCAC CTCCTTTTGG AGTTCCTTTA CCTTTCGCTT TGCCTTTGTC 
TTTCTTTTTC TTCTTGGAAC TGGAAGGAAC ACCACCTTGA GCTCGCCGTC TAAGTGCATC 
CATTAAAGTC GTCTTACCAT GATCAACATG ACCCATAATG CAGACAACGG GTGGTCTCGG 
GGGCAAGCTT TCATAGGGTA CCTGGCCTTC TTGGACTTCT TCATTTGCCG CAGCACGGCG 
CTGCATTAGT AGGGCCTCAT CGTCTTGAGA CTCACGGCTT TTAGCACGTT GGAACGACCG 
CCCAAGTTCT ATCGCGATAA GTTCCATTGT CTCCACTCCG ACAATCAAGT CTTCATCTGA 
CTTTTGGTGA TCCTCTTTCG AGTACTCTCC AATCGAGCGA AGGGTTTTCC TTAGCTCTAT 
GGCTTTTTCG CGAAAGAGGC GGGAAGTTTC GGAGAGTGAA AGAGAATGGT TCGGAATGAC 
AGCTATCAGC GATTTAGGAT CGACAAAAAC AGGGGCTGTT TTTTTAATGT GAGAGGCTCT 
CGAGCGTCGA TACTGCATAC TATCGGGGCG TCGTCCAGCT CTACCGTCGA TACGCTTTCT 
CTTGTCGTCC TGCCGCTGTT GGCGGAGGCC TAATGTGGAT TCCCGAGATT TTTGGGATTG 
CAAACGCCAC TTTGGTTTTT GATAATCCAG TATCCTTTTT GGACTTGTCT GACTATCGCG 
TTGAACATTC TTATTTTTGT CAGACAGCAT CGATTGGAGA AACTCCGACA AAGGCGAGTC 
AAATTTTTGG GGGGACGAGT CTGTTGACCG ACGCTCCTCT CCCTTTTGGA TGAAGACATT 
TTTGGTCCAG GAGTATTCAA ATTGACCAAG CCTAAGTCAA ACCGCAAAGA TTTATTCTTT 
CCACCAAGCG AATCAGGATT TTTAAGAAAC TTTCGACGAA GGGTGTCTTC TTCCTTCTGT 
TGCTGCGTAC CAGTTGGACG AAAAAAAGAT CGAGCGCTTT TTTTCGAATC AGATTGGTTC 
GAATTTTCCT TGGGCGGACG AGCGAAGAAT GTGCTCATTA TATTGTTCAC TTCTTTAGCC 
TTCTCTATCT CGCTGTCAAA ATCTCTCGTA TTTTGCGATC GAACCTGGCT TTGGTTCGCG 
TAGTATGCCC CACGTTCGGT CTTGCTGCCC CATCTTCTTG GTTTCACACT GATATGGGTT 
CGACTCTTTC TGTCACGCTG CTTACCATCC TTCCAGGATG GAGCTTCGTC GTCATCCCTC 
AGCGTGCTAT TTAATCTCCG TGTATCAGAA AGAGCCCCTG ATCCGGATGA AAACGCTGCT 
CTGACTCGAC AACCTGAAAA CGACAACGAT CGGCGTTTTG TTGCCGACGC AGCAAGTCTT 
AGCATGATAC TTCAACTATT CTTTCTAGCT CCTGCACTGC CCTCGTATCT CTACTCTTTT 
GTAAACAGAA 

 

Protein sequence

MSIKTLWRGL RPGLRYIEPS SSLCSTAFFS TNATDETFWH VKRTPIIAYP QSATKKVPSH 
IVRPPYADSG ILPVSRYGDD IVLHDKVSLK RMTDAARLAR SVLDLACSLA KPGVTTDEID 
TAVHEAIVEA NAYPSPLNYC WFPKSLCSSV NEVICHGIPD YRPLQFGDIV SFDVSCFLNG 
VHGDNCATVI VGDSQEKDEG VQAARESLYA GIETCKPGSC LSSVGSAIQD VAESYGLSSV 
EKYRGHGIAD EFHIAPYVKH YRNTDKVVLK PGMIFTIEPM LTNGASTCYE WDDDWTVATA 
DGSLAAQFEH TIHITENGVE ILTLPE