Gene PHATRDRAFT_24362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_24362 
Symbol 
ID7196072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp295168 
End bp296261 
Gene Length1094 bp 
Protein Length328 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176561 
Protein GI219109613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCAGTCGGCA TTTCTCACAG TCTACCCATA CCCCTTCGGT TATACCAATC GGTGTTGTTG 
CCCTGTTTCG GAGCGAACAC TACTACTGCT AGCTGCCCTA TATAGAAGAC ATGGATGACG
AGAAGTCGGG ATCGGCCGTA AACGATGAGC ACGTGGAGTT TGATCGGTAT CGACACATTC
AGTATTTTGC TTACTGCGTG CGACAATTGC CTGGATCCTA CAGCAAGCTC GATACAAATA
GGCTCACGCT TGCACACTTC GGTGTACATG CGTTGGATAT GTTGGGCGTT TGGGAAGACG
AAGCCATGCA AACCTCGTTG GGACTCGAAA AAAAGGCAAT CATTGACTGG ATTTATGCCA
TGCAAGTGCC AGCGAAGAAG GAACATCCTT CCCAAGCCGG ATTTAAAGGT GGCAGCTTTT
TGGGTGGATC ATTCGAAGAT ACTGCGGATC AACCTTGGCA GTATAATCAC GGGCACATTG
CCATGAATTA CACCGCATTG GCAACCTTGC GCACCTTGGG CGACGATTGG AGTCGACTCG
ACCGGAAAGG GATTTTGGAA GCATTGAAAG GATTGCAGTT GACCGATGGT AGCTTTGCTT
CGATATCGGT TGGAAGTGAA CATGACATGA GGTTTCTGTA TTGTGCCTGT TGCATCTCGC
ACATGCTGAA CGACTGGAGC TGTATTGACA TTGACAAAGC CATTTCTTAT ATCCGGTCAT
GTCGAGGTTT CGATGGGGCT ATTGCTCTTT TGCCAGGACA AGAAAGTCAT GGAGGAAGCA
CTTTCTGTGC AGTCGCGAGT CTGGTCCTGA TGAAAGCGGT TGACAAAGTC ATAGATAGAG
AATGGCGAAG GGATCTTCTC AGATGGTGTG TGAATCGTCA AGTTTGCGGT ATGCAAGGAC
GACCGAACAA AAACGAAGAT ACCTGCTACT CTTATTGGAT TGGAGGAACA CTACGACTGC
TAGACAATGA TCAGCTTTTG GACCATACCG CTCTACAAAG TTTTGTAATG AATTGTCAAA
CGCAAATGGG TGGATTTTCG AAACTGATTG GAGCGTATCC GGATATGCTG CACGCCTACT
ACAGTCTTGC GTAT
 
Protein sequence
MDDEKSGSAV NDEHVEFDRY RHIQYFAYCV RQLPGSYSKL DTNRLTLAHF GVHALDMLGV 
WEDEAMQTSL GLEKKAIIDW IYAMQVPAKK EHPSQAGFKG GSFLGGSFED TADQPWQYNH
GHIAMNYTAL ATLRTLGDDW SRLDRKGILE ALKGLQLTDG SFASISVGSE HDMRFLYCAC
CISHMLNDWS CIDIDKAISY IRSCRGFDGA IALLPGQESH GGSTFCAVAS LVLMKAVDKV
IDREWRRDLL RWCVNRQVCG MQGRPNKNED TCYSYWIGGT LRLLDNDQLL DHTALQSFVM
NCQTQMGGFS KLIGAYPDML HAYYSLAY