Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17928 |
Symbol | |
ID | 7196943 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 2319437 |
End bp | 2320491 |
Gene Length | 1055 bp |
Protein Length | 168 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176957 |
Protein GI | 219110411 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CGTTTCGAAA GGTGCGTACG GGAAGGCGGA GTACACCATG GCGGTGGGGG AAACTTTGGA AACACTGTCA GAGGCGACGA AACGGCTGCA AGTCCATGAA CCGTATGAGC CATAGGGAAC TATCTGCCGG ACAAAGATTG GACAAAGGAC TCCCCTGAAT CCCTAACAGC TCTTCCAGAA GAGTGATCGC TGAGAAATTA GAATTGAGCG ATCACACAAG TCTTCATCTT GTAAATACTT GCGTTGGCGC TCCACAACTG CACTAACAGT TACTTGCTCC GGTTTTCAAT ATAACAGTAC ATGACGTAAA ATGCAATACG ACAGTTGCCC AACGATAGCA CCCTTTTTGG GCTACATGGG CGTTGCCGCT TCCATTGTCT TTGCCAGTAA GTCGCAGCTT TCTTGCGTGT TTGGTAGCAA CAGGAATCAT GGAGCCTCTT GAGACCAAGC CCTTGAACGA TTACAGAACA TCGACGACAT TGAAACCTGA TTTTTTTGAA ACCAGTAGCT GACGTCTTTC GTCTGTCCTG TTGCTTGTAG ATGTTGGCGC CGCTGCCGGA ACAGCCCGCG CCGGAACAGG TATTATGCAG AGTGGCATCA AAAGTCCCGA GCTGGTTTGG AGAAATTTGA TACCGATAGT CATGGCGGGT GTCAACGGAA TTTACGGACT GATTACGAGT ATTGTTATAT TGGGCTCCAT TTCTGCTCCA GTGGACGGTG GATACAATCA GTATTCTCTG TATACTGGAT GCGCCCACTT GGCCGCGGGT CTGTGTTGCG GTTTGAGCGG TCTCGGCTCG GGCTTATGCA TTGGTATTGC CGGAGACGCC GCCATAATGG CGTGTGGGGC CTACAGCGTA GCCTCCAAGC GTTCGGCGGG ACGAGGTCGA GGGGGTGGGC GTGCAAGAGG TGGCGAAAAG AAGAAGGGCG GGGGCAGTGA GAAGCTGTTC GTGGCCATGG TTTTGGTCCA AGTCTTTGCC GGTAATATTG CTCTCTACGG ACTGATTGCG TCAATCATTC TGAGTCAACA AACATACTAC TGCGGCGGTC AGTAA
|
Protein sequence | MQYDSCPTIA PFLGYMGVAA SIVFANVGAA AGTARAGTGI MQSGIKSPEL VWRNLIPIVM AGVNGIYGLI TSIVILGSIS APVDGGYNQY SLYTGCAHLA AGLCCGLSGL GSGLCIGIAG DAAIMACGAY SKLFVAMVLV QVFAGNIALY GLIASIILSQ QTYYCGGQ
|
| |