Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4421 |
Symbol | |
ID | 7094340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011668 |
Strand | - |
Start bp | 3829 |
End bp | 9789 |
Gene Length | 5961 bp |
Protein Length | 1986 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643467286 |
Product | conjugative transfer relaxase protein TraI |
Protein accession | YP_002364244 |
Protein GI | 217980268 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family [TIGR02760] conjugative transfer relaxase protein TraI |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 0.478197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTCTA TCAGTCCCAT TGCGTCGAGC GCTGGCGGCG CGGCCAGCTA CTACCTCAGT GAAGAAAAGA ACCTCAATTT GCCTGACGTG TCGTTAGAAA AAGCAGCGGA CGCCAAAGAA GGGGAAACCA ACTATTACTT GAAAGAGCAA AGCGCCGAGC CCAATACCCA ATGGTTTGGC AAACTGGCAG AGCAAGAGGG AATGTTAGGT AAGCCCGTTG AAGAACATCA ACTCAAAGAG GTGTTAGCCG GTAGCCTGAA CGACCAAACG CTTAAAACCC AAAACAGCAA CGCCCGCAAC GGTTTTGACT TTACCTTTTC GGCGCCTAAA TCCGTCAGTT TGCTTGCACT CGTGGGCGGC GATAAACGCT TAATGACAGC GCACGATGAC GCGGTAAAAT TCGCGTTATC GCATATCGAG AAAGATGCGG CGCAGGCCAG ACAAACCAAC CCTGATACCA AAGCGACCTC TTTTGAAAAC ACGGGCAATT TGCTGTTTGC AATGGTACGC CACAAAACTA GCCGTGAAGA AGATCCGCAG CTGCATACCC ACTCACTCAC CGCCAACATG ACCAAGGACA GCGAGGGCAC ATTGCGCGCG CTGGCAAGCA GCTTTAAACA AAAAGGCGGC ATCATCAATG GCACGGGTGA GCGGGTTTAT AACCATCAAA AATACTACAC CTCGCTCTAT CAAAGCGCCT TAGCGCGCAG TGTTGAACAA GCGGGTTATC AAACTCGTTC ACTGGGTAAT AATTTGTTTG AAGTGGAAGG TGTCCCGCAG TCCTTACTCG ATACCTTTTC AACCCGTAGC CAGCAAATCA ACGAACAAAC CCAAAGCTTA GGTTTAGACT CCCAAGCGGC GCGGGATGTG GCCGCAAAGG ACACCCGCAA GAGTAAAGCC TATACCAGCG AAGCCACCTT GTTTGAGCAA TGGAAAAACA AAGCCAATAA CAGCGGCTTT AACCTGACAA GCTTCGTGAC GGACAGCATG TCACGAGAAA CATCACTCAA TGCGTTAGCG CTCAAACCCG CCGCTATCGA TGCGGTGAGT CGTGCGATTG AGCACGCCAG TAACACCCAA AACCGTTTTA ATTACGCGAA ATTAGTGGAA TCAGCCACGC TTGAATTTAC GCGCGGCCAG AAGCTCGATG CGCTCGATAT TAAATTGGCA CTCGATAAGC ACATTGAAGA TGGCGCACTC ATTCCGCTTG ATAAAGAGTC TGCGACCTTT ACCAGCGCCG CCCACATCAA AGCCGAAACT AACCTGCTAG AGAGCATCAA GCCAAAAACG GCCAACATGC GCCAAGTGGT CGATACCAAC ACGCTTCAAG GCAAAGGCTT AAATGCGGAC AACCAAAAGA AAGTCTCTGA ACTGTTCGCC AGTACCAAAC AAGTTAACCT AGTGAACGTC TTTGGTAGCA GTGAACAGCT CGCGACCGCC CTGCTCAATG TCGGTGAGGC CAACGGTAAA CGTATTCACA TCATTACCCC TGACATGAAA AGCAAACTGC AAACCAGTGA ACGAGTGCAA CGCGATTCAT CGACTGTGGT GAAGTGGATA ATGAACCACT TCAAACCCGA CCACACCCAT ACACTCAGCA GCTTTACTAA AACGGCCAAC AACACTAACC GCGATATTTT AGTGGTTGAG AACGCCAATA AACTCGGCCT TAACGACTTT AATGCCCTGC TCGCGCAAGC CAAAGCGGGT AACAGTAAAG TGATTTTGCT CAATCACGCC AATGCCAAGC AAGGCATGAA AGCCGGTAAC GCTATCGAGG TACTTAAAAA AGGCAACGTA AACGAAAGCA ACTGGGTCGC CACCAAACAA AGCAACACAG CCATGCGACT GCATGAAAGC AAAGACAGTG ACAGGGTTAA CCTGATTGCA AAAACTTACG CGCAACTGCC CGAGAAGCAA CACACCCAAG TCATTGCGGG CACCCATAAA GATGTGAAGC AGCTTAACAG CGCCATTCGC GCAGAACTGC AAAATCAAGG TGATGTATCG CGCCTTGGGC TCAACATCCC TACCCTTAAT CCCGTGTTCT TATCCGCGCA GCAACGGGAA GTCGTCGGCC AGTACACCAA GGGCATGGTA CTCACCCAAT GGCAAAAAGT CGGTGGCCGC AATCAACAGC AGCAATTGAC GGTGGACAGT GTAAACCGTG ATAACAACAC CCTCACGCTG ATAGACAAAA ACGGTAAAGC ATCTGAGATT AACCCCAGCA GCAAAGCCTT TAAAGCCGCA GAGTACGTGA TCGCTAAACC GGACAATTTA CATATCGCCA ACGGCGATAA ACTCATCATG GCCACAAACC ATCAAGACAG TGGTTTGAGC AAACAAATTT ATACGATCAA CGCCCTGTCC AAAGAATGGG TCACGCTCAA AGACGAAAGC GGCAAACAGC ACAGCGTTAA AGCCAGTGCA TTGCACCATG CGCCGCTCAA TCATGGTTAC GCCACCACGC CAAGCAATGC CAGCCCTAAT GCAAGTCACC ACATCGTCAA CATTAAAGCC TATAGCGCCT CAAAAGAGTG GTTACATGAC ACCCTGACAC AAGGCATCAA ACACATCGAT ATATTCACCG ACAAGGCACA ACAATTTGAT GACCGATTAG AAAAAAGTGA GGTGAAACCA TCCAGTATTT CGCGCATCAT GCAAGCCGCT GACATGCCAG AAAAGTTCGT GAATAGCCAA ACCACGGCCC TGCTCACCCA AGATGTGACC GCAGCACTGA ATGCCATTGG TGCCCAGCAT CAAGACAAAG GGCTTATTCA CAATGCCGTG GACTTTGCCA TCCAGCACAT TAGCGAGAAA GAAGCCGGTT ACTCACAAAA AGAGCTGATT GTTAATGCGA TCAAGTACGC ATTTGAGGAA AAAGGCACCA GCATTACCCA ACATGAAATC ATCAACACCC TGCAACACAT GGCCACGAAC AGCACGGATA AAGGCGCGCC CTCACTCCTG AGCGCCGAAT ACCACGACGG CACCCGCTGG ACAACCCAAG CCGCTATCGA TACCGAAGTG CGTATTTTAG ACAGACTGCA AGCGGGCAAA GATCAACTTG CGCCCCTTAC CAGCGTTGAA CACGCCGCGC AGGTACTCAG TCAAAATCAA AACCTGACCG ATGGCCAAAA AGACGCGACC TTGCTTATCA CCACCACCAA AGACCGATTT GTGGGTGTTC AAGGGTTAGC GGGTACGGGT AAATCGACCA TGCTTGAAAC GGGTATCGAT CTTGTTAAAC AAAGCGAATC CATTCTCAAC ACACAACCCA ATAAGACACC GACACAATTC ATCGGTCTAG CGCCGACACA CGCCGCCGTT AACGAACTCA AAGACAAGAA CGTCGAAAGC CAAACGGTGC AATCACTCCT AAGCAACTTT TTAAGCCAAG ATGCGAAACC TGACCAATAC GCCAACACCG TGTTCTTGCT CGATGAATCC TCGATGACCA GTAACGCCCA AATGGATAAA TTTACCCATT TGATTGAGAC AACAGGCGCG CGCGCCGTGT TCTTGGGTGA CACTAAACAG TTAACGTCCC AAGAAGCGGG TAAACCTTTT GAACTCGCGT TAAACAAAGG CGCAATCAAT AGCGTCACCA TGAAAGACAT TGTGCGCCAA CAGAACAGCA CACTACTGAG TGCGGTACAC AATATTGTCG ATCGCCAAGG CGAAAGCGCT ATTGATAAAA TTCAGCAACA ATTACCCTTT GACCAATACA CCGCGCCCAC CGCGAACGAC GCGGTAACGC CCGAAAAGCA GGCTACCGCT AACATCAATC AAAGCTTGAA TATCATTTCA ACTTTGCAGC CGCTAACTGA TAACCCAAAG AAAAACCAGC AACTTGCGAC CGAAGCCCTG CCCGCCACTG TGGCACTGGA ATACTTGGCC AGAACACCTA AAGCGCGTGA AAATACCCTT ATCATTGCGT ACACCAACAA GGAACGCGAC GACATTACCC ACGAAATCCG CCAAGGGTTA CAGCAACAAA AAAGCCTCAG TAACGAGCAA TTCACTGTAC CGAGATTACG TGGAGTCCAT GCCAGCAAGG CCGAACTGGC GACCATGTTG CCCTATCAGC AGGGGTTAAT CCTGACGACC AGTAAAGACA GTTATTTTGA AATTATGAAG GTCGATAAGC GCAATAACAT GCTCACCCTC GCGGATATGA AAACTGGCGA GGAAAAGCAT TTCTTCCCCA AAAATCATGG CCACAAATTC ACGAACCTTT GGGCTAAGAG TGAGCAACCT CTCGCAGAAG GCGACAGTAT CATGCTCCGC AAAAGCGATA TTGACCGTGA AATGCAGGGC AACAAAACCT ATACCGTTAG CCGCATTGAC GATAAACAAA TGCAGCTCAA ATCCACGGAT AACCACACAT TAACGCTCTC AACCAAAGAG TTGAAAGATG CTCATTGGGA TTACGCATAC ACCCGCACCG CCGATATGGC GCAAGGGGCA ACCTATGAGA ATGTCATTAC TGCGATTAAG GGCCAGGGTG CATTAACTAA CGTAAGGCGC GCGTATATCG ATATCACCCG TGCCAGTAAG CACGTAAAAA TCATCACCGA TAACCCGCAA AAAATGATGC TCTCATGGGT CAATAACGAT CCCAATAAAG TCTCTGCACT TGAGACAAGA GATAAATATT ACCCTGAACA TACCCCGCTA TTTAATGACA AACCTTTACC GCAGGAAAAC CCAAAGTACC TCGATGTGAA TGGATATGTG GATCTAAAAC TGATGGCCAC CGAGCTAAAT GCCAAGCTTC CGGCCTACAG TGAATCACTG GCAACGCAGC TTTTAGGTGA GCCGAACCAC GATAAATCAG ACAAAGATAA CCTGACATTT GGCAAAGAGG GGAGCCTAAC ATTGACCACA ACGGGCCAAT ATCGTGGCTA TTTTAAAGAC TGGAAAACCG GCGATAAAGG CACCTTAATC AACCTGATTA TGGTCGCTGA AAAGTGCAGT TATAAAGATG CACTTTATAA AGCCGATAAA ATGATGAACG AACCCGATAA ATATAATCTG GTAAAAAACC CACAGCATGA TGAATTAACA CATGCCATTC CGGTTAAGCA AAGTCAATTA GAAGCGCGCG CGAAGCAATA CTTTAATGAA GCGAAACCTA TCGAAAACTC ACTCGCACAG ACGTATTTAA ACAAGCAAGG CATCGACGTA AAGCAGCATG AAAACTTACG TTTTCACGAT GCCGTTTATT CGTCAGAAAA ACGTGGGACC TTCCCCGCAT TAATTGCGAA CATCACCAAT GATAAAGATG AGACTAAGGC GGTAGAAATT ACTTACCTTG ATAAATCCAG CGGTGACATT GCAGCGCTAA AAATAAATAA GCGCATACTC GGCTCTAAAT CTGGGAACAG CACGACGATC AACAAAGGCA ATAATTCAGA CTATAGTATT GTCGCTGTCG GTGTAGAGAA CGCGCTTAAG ATAAATGCTG ACAATAAAAA CGGGGCTGAC GTTATTGCGC TAAACAATAA TAATGACACT AAAACATTCA ATACAAATGA ATTGCGCGAA AACGTGATAG TGGTACTTGA TACTAGTAAT TCACAAGACA CTGCAAAACT GGCAAGTGAC CTTACGGATA AATTCAGCAA GGAGAATATA CATGCGGTTA TTATTGAACC CAATCTGATA CCTGACGGCT TAAACAAAGT CGAAACGACA AAACAATTAG TCAATGAAGC GGTCTATAGC ATAACGACAA AAGACAACAC CCTATCTAAA GCCATTCAAT CACTGAGTAA TGATATTGCA GGCACAAAAA ATATCACGAT GAAGGATGAC AGCACTAACG TAGCGACGAA TAAAATAAAG CACGATGAAC ACTATCAACA TTTAGCAATG GATAGCCACC GTTCACCCAC GAAAGAACAT AGCCCCAACA TCGACAATCC TAAATTGGAT ATTGGTGAAA AAACAATGTA A
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Protein sequence | MLSISPIASS AGGAASYYLS EEKNLNLPDV SLEKAADAKE GETNYYLKEQ SAEPNTQWFG KLAEQEGMLG KPVEEHQLKE VLAGSLNDQT LKTQNSNARN GFDFTFSAPK SVSLLALVGG DKRLMTAHDD AVKFALSHIE KDAAQARQTN PDTKATSFEN TGNLLFAMVR HKTSREEDPQ LHTHSLTANM TKDSEGTLRA LASSFKQKGG IINGTGERVY NHQKYYTSLY QSALARSVEQ AGYQTRSLGN NLFEVEGVPQ SLLDTFSTRS QQINEQTQSL GLDSQAARDV AAKDTRKSKA YTSEATLFEQ WKNKANNSGF NLTSFVTDSM SRETSLNALA LKPAAIDAVS RAIEHASNTQ NRFNYAKLVE SATLEFTRGQ KLDALDIKLA LDKHIEDGAL IPLDKESATF TSAAHIKAET NLLESIKPKT ANMRQVVDTN TLQGKGLNAD NQKKVSELFA STKQVNLVNV FGSSEQLATA LLNVGEANGK RIHIITPDMK SKLQTSERVQ RDSSTVVKWI MNHFKPDHTH TLSSFTKTAN NTNRDILVVE NANKLGLNDF NALLAQAKAG NSKVILLNHA NAKQGMKAGN AIEVLKKGNV NESNWVATKQ SNTAMRLHES KDSDRVNLIA KTYAQLPEKQ HTQVIAGTHK DVKQLNSAIR AELQNQGDVS RLGLNIPTLN PVFLSAQQRE VVGQYTKGMV LTQWQKVGGR NQQQQLTVDS VNRDNNTLTL IDKNGKASEI NPSSKAFKAA EYVIAKPDNL HIANGDKLIM ATNHQDSGLS KQIYTINALS KEWVTLKDES GKQHSVKASA LHHAPLNHGY ATTPSNASPN ASHHIVNIKA YSASKEWLHD TLTQGIKHID IFTDKAQQFD DRLEKSEVKP SSISRIMQAA DMPEKFVNSQ TTALLTQDVT AALNAIGAQH QDKGLIHNAV DFAIQHISEK EAGYSQKELI VNAIKYAFEE KGTSITQHEI INTLQHMATN STDKGAPSLL SAEYHDGTRW TTQAAIDTEV RILDRLQAGK DQLAPLTSVE HAAQVLSQNQ NLTDGQKDAT LLITTTKDRF VGVQGLAGTG KSTMLETGID LVKQSESILN TQPNKTPTQF IGLAPTHAAV NELKDKNVES QTVQSLLSNF LSQDAKPDQY ANTVFLLDES SMTSNAQMDK FTHLIETTGA RAVFLGDTKQ LTSQEAGKPF ELALNKGAIN SVTMKDIVRQ QNSTLLSAVH NIVDRQGESA IDKIQQQLPF DQYTAPTAND AVTPEKQATA NINQSLNIIS TLQPLTDNPK KNQQLATEAL PATVALEYLA RTPKARENTL IIAYTNKERD DITHEIRQGL QQQKSLSNEQ FTVPRLRGVH ASKAELATML PYQQGLILTT SKDSYFEIMK VDKRNNMLTL ADMKTGEEKH FFPKNHGHKF TNLWAKSEQP LAEGDSIMLR KSDIDREMQG NKTYTVSRID DKQMQLKSTD NHTLTLSTKE LKDAHWDYAY TRTADMAQGA TYENVITAIK GQGALTNVRR AYIDITRASK HVKIITDNPQ KMMLSWVNND PNKVSALETR DKYYPEHTPL FNDKPLPQEN PKYLDVNGYV DLKLMATELN AKLPAYSESL ATQLLGEPNH DKSDKDNLTF GKEGSLTLTT TGQYRGYFKD WKTGDKGTLI NLIMVAEKCS YKDALYKADK MMNEPDKYNL VKNPQHDELT HAIPVKQSQL EARAKQYFNE AKPIENSLAQ TYLNKQGIDV KQHENLRFHD AVYSSEKRGT FPALIANITN DKDETKAVEI TYLDKSSGDI AALKINKRIL GSKSGNSTTI NKGNNSDYSI VAVGVENALK INADNKNGAD VIALNNNNDT KTFNTNELRE NVIVVLDTSN SQDTAKLASD LTDKFSKENI HAVIIEPNLI PDGLNKVETT KQLVNEAVYS ITTKDNTLSK AIQSLSNDIA GTKNITMKDD STNVATNKIK HDEHYQHLAM DSHRSPTKEH SPNIDNPKLD IGEKTM
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