Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2413 |
Symbol | |
ID | 7094335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011667 |
Strand | + |
Start bp | 77790 |
End bp | 78338 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643701099 |
Product | integrase family protein |
Protein accession | YP_002364240 |
Protein GI | 217980190 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 79 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 97 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACC GCAAACACCT CACATCCCGC GAGGTCGAGC GCCTGATCAC GGCCACCCGC GGCAGCCGCA CCGAGCTGCG CGACCGCTGC CTGATCCTCT TGATGTTCCG CCATGGGCTG CGGGTGTCCG AGGCCTGCGC GCTGAAGCTG CACCAGGTCG ATCTCGAAAG TCGGGTGCTG CACGTGGCCC GGCTTAAGAA GGGGTTGTCG ACCACGCACC CGCTCCGGGG CGACGAGCTG CGGGCCATCA AGGCCTGGCT CACCGAACGG GCGCGTCTCG GCCCGGCGGG CGACACGTTC TTCGTCTCGG AGCGGCGTGC GCCGCTCAAC CGCCGGACAG CCTGGGTGGC GATCCGGCGC TACGGGGAAC TGGCCGAGCT GTCCGTCGAG GCGCACCCGC ACATGCTGCG CCACGCCTGT GGCTACGCAC TCGCCGACCA GGGCGCGGAC ACCCGCCTCA TCCAGGACTA CCTCGGGCAC CGCAACATCC AGCACACCGT CCGCTACACG GCGACCAACC CTGCGCGGTT CGAGCGGCTG TGGCGGTGA
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Protein sequence | MNDRKHLTSR EVERLITATR GSRTELRDRC LILLMFRHGL RVSEACALKL HQVDLESRVL HVARLKKGLS TTHPLRGDEL RAIKAWLTER ARLGPAGDTF FVSERRAPLN RRTAWVAIRR YGELAELSVE AHPHMLRHAC GYALADQGAD TRLIQDYLGH RNIQHTVRYT ATNPARFERL WR
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