Gene Tmz1t_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2413 
Symbol 
ID7094335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011667 
Strand
Start bp77790 
End bp78338 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content70% 
IMG OID643701099 
Productintegrase family protein 
Protein accessionYP_002364240 
Protein GI217980190 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC GCAAACACCT CACATCCCGC GAGGTCGAGC GCCTGATCAC GGCCACCCGC 
GGCAGCCGCA CCGAGCTGCG CGACCGCTGC CTGATCCTCT TGATGTTCCG CCATGGGCTG
CGGGTGTCCG AGGCCTGCGC GCTGAAGCTG CACCAGGTCG ATCTCGAAAG TCGGGTGCTG
CACGTGGCCC GGCTTAAGAA GGGGTTGTCG ACCACGCACC CGCTCCGGGG CGACGAGCTG
CGGGCCATCA AGGCCTGGCT CACCGAACGG GCGCGTCTCG GCCCGGCGGG CGACACGTTC
TTCGTCTCGG AGCGGCGTGC GCCGCTCAAC CGCCGGACAG CCTGGGTGGC GATCCGGCGC
TACGGGGAAC TGGCCGAGCT GTCCGTCGAG GCGCACCCGC ACATGCTGCG CCACGCCTGT
GGCTACGCAC TCGCCGACCA GGGCGCGGAC ACCCGCCTCA TCCAGGACTA CCTCGGGCAC
CGCAACATCC AGCACACCGT CCGCTACACG GCGACCAACC CTGCGCGGTT CGAGCGGCTG
TGGCGGTGA
 
Protein sequence
MNDRKHLTSR EVERLITATR GSRTELRDRC LILLMFRHGL RVSEACALKL HQVDLESRVL 
HVARLKKGLS TTHPLRGDEL RAIKAWLTER ARLGPAGDTF FVSERRAPLN RRTAWVAIRR
YGELAELSVE AHPHMLRHAC GYALADQGAD TRLIQDYLGH RNIQHTVRYT ATNPARFERL
WR