Gene Msil_3894 details

Gene Information

• Locus tag: Msil_3894
• ID: 7092591
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 4271752
• End bp: 4272420
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643467179
• Product: ABC transporter related
• Protein accession: YP_002364137
• Protein GI: 217979990
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 48
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTGTCCT GCAGCAACGT GGGAAAGACC TACGCGACCG AACGAGGGGA TATCGTAGCC 
GTGCGGGGGA TCGATCTCGA AGTGCCGAGC GGCCAGTTCG CCGCAATCGT CGGGCGCTCC 
GGCTCGGGCA AATCGTCGCT CATGGCCATG ATCGGCGGGT TAAGCCGCCC GAGCCAGGGC 
GTGGTGCGCG TCGAGGGCGC CGACATCTGG GCGCTCCCGG ACGACGCTCT GGCGCAGTTC 
AGGAATCGCA AGATCGGATT TGTTTTCCAA TTCGCAAGTC TCTTGCCCGC CCTGCGCGTC 
ATCGACAATG TGGCGCTGCC GGCTCTCCTT GGCCGTCGTC TTGACGCCGG CGCAGCCTAC 
ACGAGAGCGG CGCGGCTCCT CGCGAGGCTC GGATTGGCCG AGCGCCTCGA CGCCTATCCG 
GCGGAGATAT CGGCCGGACA ACAACGCCGC GCCGTGATTG CGCGGGCTCT CATCAATGCG 
CCGTCGCTGC TGCTTGCGGA CGAGCCGACC TCGGACCTCG ACGAACGGAC CGAGATGGAG 
ATCATGGACG AGTTTCGCAC CCTCAACCGC GACCATGCGA TGACGGTCAT CATCGTCACC 
CACAATCTCC GTCTCGCGGA ACAGGCGGAC CGTGTCTTCC ACATCGCCAA TGGCGGTCTC 
GTCAAGTGA 

 

Protein sequence

MLSCSNVGKT YATERGDIVA VRGIDLEVPS GQFAAIVGRS GSGKSSLMAM IGGLSRPSQG 
VVRVEGADIW ALPDDALAQF RNRKIGFVFQ FASLLPALRV IDNVALPALL GRRLDAGAAY 
TRAARLLARL GLAERLDAYP AEISAGQQRR AVIARALINA PSLLLADEPT SDLDERTEME 
IMDEFRTLNR DHAMTVIIVT HNLRLAEQAD RVFHIANGGL VK