| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3851 |
|---|
| Symbol | |
|---|
| ID | 7092547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 4218003 |
|---|
| End bp | 4218434 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643467136 |
|---|
| Product | Cupin 2 conserved barrel domain protein |
|---|
| Protein accession | YP_002364095 |
|---|
| Protein GI | 217979948 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.0747223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCTTCAG TCTTTGTCGT TGCGACCCAG GATCTTCCAA GAGCGCAAGT CGGCGGCGTC
GACGACCCCA AAGTCCGCTG GGCAGGCGCA TTCGCCGCCT ATGGCGGCCA CGGAACGACG
CAATCCTCCA CCATCGTTTA TGAAATCGAG GCGGGCGACC GGCTCGGCTG GCACACCGAC
GCCACCGAGG AGACGCAATA TATTCTCGCC GGCTCCGGAG AGCTGCAGAT GGAGGACGGG
AGCGTGCATC AGGTGGGGCC GGGGAGCGTT TTCGTGCTGC CGACCCCTGT GCGGCACGAT
CTTGTCAACA CGGGCGCCGA GACTTTGCGC GCGGTCGCGT TCTTCGCGGC GCCGATGTTC
ACCCAGACTT TCGACAACGC AATGTTGCCG CCTAACATCC ACGTGCTCGG CACTCCGAAC
CGCGAAGGGT AA
|
|---|
| Protein sequence | MPSVFVVATQ DLPRAQVGGV DDPKVRWAGA FAAYGGHGTT QSSTIVYEIE AGDRLGWHTD
ATEETQYILA GSGELQMEDG SVHQVGPGSV FVLPTPVRHD LVNTGAETLR AVAFFAAPMF
TQTFDNAMLP PNIHVLGTPN REG
|
|---|
| |