| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3730 |
|---|
| Symbol | |
|---|
| ID | 7093084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 4089935 |
|---|
| End bp | 4090957 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643467015 |
|---|
| Product | Transketolase central region |
|---|
| Protein accession | YP_002363974 |
|---|
| Protein GI | 217979827 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.98943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGCA AGCTTAGCTA TAAGATGGCC GTCAACGAGG CGCTCGACCT CGAAATGACG
CGCGACCCAA CCGTCATTTT GATGGGCGAG GACATTGTCG GGGGCGCCGG CGCGCCCGGC
GAAGACGACG CCTGGGGCGG CGTGCTCGGG GTCACCAAGG GGCTCTTCGC CAAGCACGGC
GCGCGCGTCA TGGACACGCC GCTGTCGGAG TCGGCCTATG TCGGCGCTGC GATAGGCGCC
GCCGCCTGCG GCATGCGGCC GGTCGCCGAA CTGATGTTCA TCGACTTCAT CGGCTGTTGC
TTCGACGAGA TCTTCAATCA GGCGGCGAAG TTCCGCTATA TGTTCGGCGG CAAGGCTGAA
ACACCGGTCG TGATCCGCTG CATGATCGGG GCGGGCTATC GCGCCGCCGC GCAACATTCC
CAGATGCTGA CGCCGCTCGT CACCCACATT CCGGGACTGA AGGTCGTCTG CCCCTCAAAC
GCCTATGACG TCAAGGGACT GCTGATCCAG TCGATCCGCG ACAATGATCC GGTGATCTTC
TGCGAGCACA AAAATCTCTA CGCGCATGAG GTCGACGTTC CGACGGAATC CTACACGATT
CCCTTCGGAG AGGCCGCGAT CCCCCGCGAA GGCAAGGATG CGACGATCGT GACTTACGGG
CTGATGGTGC ATCGCTCGCT CGAGGCCGCC GAGAAGCTCG CCAAGGAGGG CGTCGACGTC
GAGGTCATCG ACCTGCGCAC CCTGTCGCCG ATGGACTGGG ACACCGTCAT CGAAAGCGTC
GAGAAAACCG GCCGGCTGAT CGCCGTCGAC GAAGCGCACC CGCGCTGCTC GATCGCCTCC
GACATTACGG CCTTCGTCGC GCAACACGCC TTCAAGGCGC TGAAGTCGGC GCCGCAAATG
GTGACCGCGC CGCATTCGCC GGTGCCGTTC TCGCCGACGC TTGAGGACAT CTACATCCCG
TCCGCAGAAA CCATTGCGGG CGCCGTCAAG AAAACCATCG TCCAGAAGAT GGTCGCAGCC
TAA
|
|---|
| Protein sequence | MARKLSYKMA VNEALDLEMT RDPTVILMGE DIVGGAGAPG EDDAWGGVLG VTKGLFAKHG
ARVMDTPLSE SAYVGAAIGA AACGMRPVAE LMFIDFIGCC FDEIFNQAAK FRYMFGGKAE
TPVVIRCMIG AGYRAAAQHS QMLTPLVTHI PGLKVVCPSN AYDVKGLLIQ SIRDNDPVIF
CEHKNLYAHE VDVPTESYTI PFGEAAIPRE GKDATIVTYG LMVHRSLEAA EKLAKEGVDV
EVIDLRTLSP MDWDTVIESV EKTGRLIAVD EAHPRCSIAS DITAFVAQHA FKALKSAPQM
VTAPHSPVPF SPTLEDIYIP SAETIAGAVK KTIVQKMVAA
|
|---|
| |