| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3708 |
|---|
| Symbol | |
|---|
| ID | 7093062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 4070600 |
|---|
| End bp | 4070989 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643466994 |
|---|
| Product | PilT protein domain protein |
|---|
| Protein accession | YP_002363953 |
|---|
| Protein GI | 217979806 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0520444 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCGTCG TCGATAGTTC GGTGTGGATC GCCAATCTGC GCGATCTCGA CACGCGAGCG
GTGCGCGCGT TGCGATCGAT CGAAGACCCC AACGAAATTT TGATCGGCGA CCTCATTTTG
CTGGAAGTGC TGCAGGGCGC GCGGAGCGAG GCGCATGCGG CGCGGATCGA GGCCAGTCTG
CGCCAGTTCC GGATCGAGCC CCTGCTCGAT GCCGAGCTTG CCGTTCACGC CGCGCAAAAT
TATCGCGCGC TACGCGAAAA GGGCGCGACC GTGCGCAAGA CCATCGACCT CATCATCGGA
AGTTTTTGCC TCGCCCGAGG CCACGCCCTG CTCCACGACG ACCGCGATTT TGCGCCGATG
GCGGAGCATC TTGGGTTGCG GGTGATCTGA
|
|---|
| Protein sequence | MIVVDSSVWI ANLRDLDTRA VRALRSIEDP NEILIGDLIL LEVLQGARSE AHAARIEASL
RQFRIEPLLD AELAVHAAQN YRALREKGAT VRKTIDLIIG SFCLARGHAL LHDDRDFAPM
AEHLGLRVI
|
|---|
| |