Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3703 |
Symbol | |
ID | 7093057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 4063835 |
End bp | 4065973 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643466990 |
Product | penicillin-binding protein, 1A family |
Protein accession | YP_002363949 |
Protein GI | 217979802 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.053736 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACTC AAGGCTCCAG CCGCGGAGAG CGCGGCCCCG CCCGCAGCGG CCCGGCGCGC AAGAAGCCGC GGCGCCGCGG CTGGAGCCTC GCCGGCGCCG CCTCGCTGCT GCTGACGCTC GCGGTCTGGG CCGGCGTCGC GGGCGCGGCG ATCATCGCCT TCTACGCGAC AAAGCTGCCG CCGATCGACC AGCTCGCGGT GCCGAAGCGC CCGCCCAACA TCGCGATCCT GGCCGACGAC GGCAGCCTCA TCGCCAATCG CGGCGACACA GGGGGCGCGA GCGTGCGGCT CGCCGATCTG CCGCCCTATC TGCCAAAGGC CTTCGTCGCC ATCGAGGACC GGCGCTTTTA TTCCCATTGG GGCGTCGATC CGATCGGCAT CTTGCGCGCT TTGACCCGCA ACGCCGCGGG CGGGGCGACG CAGGGCGGCT CGACGCTGAC ACAGCAACTT GCAAAGAATC TGTTCCTGAC GCAGGAGCGC ACGGTTTCGC GCAAGATCCA GGAGGCGATC CTCGCGGTCT GGCTCGAACA TAAATATTCG AAAAACCAGA TCCTCGAACT CTATCTCAAC CGCGTCTATT TCGGCTCCGG CGCCTATGGC GTCGAGGCGG CGGCGCAGAA ATATTTCGGC CATGGCGCGC GCAATCTGAC GCTGGCCGAA TCGGCGACGC TGGCTGGCCT CATGAAGGCG CCGACAAAGC TCGCGCCCAA CCGCAACGCC GCCGGCGCGC GCGAGCGCGC CGCCCAAGTC ATCGCCGCCA TGGTCGACGA GGGCTTTATT ACCGACGCCA TGGGAAAATT CGCTCTCGCC CATCCGGCGG AAGCGACAAA ATCCGATGGC GCGGGCACGG CCAATTACGC CGCCGATTAT GTGATGGACG TTCTCGACGA CACCATCGGC GCGATCGAGG AGGATATCGT CGTCGCGACG ACGATCAGTG CGGCGCTGCA AGCCAATGCC GAAAAGGCGC TGACCGAGGA ACTCGACCAG AAGGGCGCGA AATTCGGCGT CGGCCAAGGC GCTTTGGTGT CGCTCGATCC GACCGGCGGC ATCAAGGCGC TGGTCGGCGG GCGCAATTAT GCCGACAGCC AGTTCAACCG CGCGACCGCC GCAAGACGCC AGCCGGGATC GGCGTTCAAA CCGTTCGTCT ATCTTGCGGC GCTCGAACAT GGGCTGACCC CGGCGAGCGT CCGCGAGGAC GGCCCGATCA ACGTCCGCGG CTGGCAGCCG GAAAATTACT CGCGGCAATA TTTCGGCCCC GTCACGCTGA CCAAGGCGCT CTCGCTGTCG CTGAATACGG TCGCGGTGCG GCTCGGCGTC GAGGTCGGCC CGAAAACCGT CATCGCCACG GCGCATCGGC TCGGGATCGG CTCGGAACTT AGCCCCAACG CCTCGATCGC GCTTGGAACG TCGGAGGTGA GCCCGCTCGA ACTTGTGGCC GCCTATGCGC CCTTCGCCAA TGGCGGCATC GGCGTGCAGC CGCATATCAT CGTCCGCGTC AAGACGGCCG CCGGAAAGCT GATGTATGCG CGCAAAGGGT CGAGCAACGG CCGCGTCATC GACGGCGCCT ATCTGCCGAT GATGAACGTC ATGATGCAGG AGACTCTGCT GACCGGCACG GCGCGCAAGG GGGATGTCCC AGGCTGGCAG GCGGCGGGCA AGACCGGCAC CAGCCAGGAT TGGCGCGACG CCTGGTTCGT CGGTTACACG AGCCATCTCG TCACCGGCGT CTGGCTCGGC AATGACGACA GCTCGCCGAC GAAAAAAGCG TCGGGCGGCA CTCTGCCGGT GGAGATCTGG TCGCGTTTTA TGCGCGCGGC CCATCAGGGA ATTCCGCCCC AGCCGCTGCC GGGCGGCCTG TGGCAGGCGC CTCTCGTCGC GCCGCCCTTC TGGCCGGATG CGCCGACGTC CGTCGGCGCT CCCCCGCCCG TGGCGGACGC GGGCGGGCCC GCGGCACCGA CCGGCTATCC GGCTTTTCCA GGAGCGCAGC CGCGCCGGAC CGAGGCCGAC GCTTCCCCGC GCGGACGCAG CGGCGGGCTC GTGCCGCCCG GGCTTATTCC CAACCCGGGC GATTCCGCGA CGGCGCGGCC AGCGCCGCGC GAGCGCAATT TTTTTGAAAA TCTGTTCGGC GGCGGTTAG
|
Protein sequence | MATQGSSRGE RGPARSGPAR KKPRRRGWSL AGAASLLLTL AVWAGVAGAA IIAFYATKLP PIDQLAVPKR PPNIAILADD GSLIANRGDT GGASVRLADL PPYLPKAFVA IEDRRFYSHW GVDPIGILRA LTRNAAGGAT QGGSTLTQQL AKNLFLTQER TVSRKIQEAI LAVWLEHKYS KNQILELYLN RVYFGSGAYG VEAAAQKYFG HGARNLTLAE SATLAGLMKA PTKLAPNRNA AGARERAAQV IAAMVDEGFI TDAMGKFALA HPAEATKSDG AGTANYAADY VMDVLDDTIG AIEEDIVVAT TISAALQANA EKALTEELDQ KGAKFGVGQG ALVSLDPTGG IKALVGGRNY ADSQFNRATA ARRQPGSAFK PFVYLAALEH GLTPASVRED GPINVRGWQP ENYSRQYFGP VTLTKALSLS LNTVAVRLGV EVGPKTVIAT AHRLGIGSEL SPNASIALGT SEVSPLELVA AYAPFANGGI GVQPHIIVRV KTAAGKLMYA RKGSSNGRVI DGAYLPMMNV MMQETLLTGT ARKGDVPGWQ AAGKTGTSQD WRDAWFVGYT SHLVTGVWLG NDDSSPTKKA SGGTLPVEIW SRFMRAAHQG IPPQPLPGGL WQAPLVAPPF WPDAPTSVGA PPPVADAGGP AAPTGYPAFP GAQPRRTEAD ASPRGRSGGL VPPGLIPNPG DSATARPAPR ERNFFENLFG GG
|
| |