| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3648 |
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| Symbol | |
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| ID | 7092921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 4007651 |
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| End bp | 4009381 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643466936 |
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| Product | transcriptional regulator, NifA, Fis Family |
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| Protein accession | YP_002363895 |
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| Protein GI | 217979748 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.4281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCATG CACAGACACC TACGGCGCCA CAGCCGATCG GCCGCGCCGC CGATCCGGGG
GAAACGACTC TCGTCGGCAT TTACGAAATT TCGAAGCTTC TTGCGTCGGT AAACAGGCTT
GAGGTGTCCC TGGCCGGCGT GTTGACGTTG CTTTCCAGCT TTCTCGAGAT GCGGCATGGG
CTGATTGCCC TCCTGGATAA AAACGGCAAG CCGGAAATCG TCGTCGGCTC CGGTTGGTCG
GAACAGAATG CGAAGCTTTA TTTCGACCGC CTGCCGGAAC GGGCGATCGG CCAGATCGTC
ACCACCAAAA TGCCGCTGGT CGTTGAAAAT GTTTACGCTT CGCCCCTGTT CGAAGGGTCG
GACCTCACCG GCTGGGGACG GGCGGATGGC GAGCCCTTCG CTCTGATCGG CGTTCCAATC
AAGGATGGCG ATGAAGTTAT AGGCGCCTTG ACTGTCGATC GTAACAATAC AAACCGCACC
AGCGTCAGAT TCGATCATGA TGTGCGTTTT TTGACCATGA TCGCCAATCT GGTCGGCCAG
ACCCTCCGCC TGCAAAAGCT CGTCGCGCGC GATCGCGAGC GGCTGATGCA GGAAAATGCG
CGGCTCGAAA AAAGCGCCCG TCCTCGCTCG CCCGAGACGC GATTCAGCGG CATCGAGGGC
ATCGTCGGCG ACAGCCCGGC CGTGCGCGCC GTCGTCAAGA AGATCCGGAT CGTCGCAAAG
AGCCGTTCGA CCGTGCTGCT GCGCGGCGAA TCCGGCACCG GCAAGGAGCT TTTTGCGGCC
GCGATCCATA ATCTGTCGCC GCGCAGCGGC AAGCCTTTCA TCAAGCTCAA TTGCGCGGCT
CTGCCGGAGA GCGTGCTGGA GTCGGAGCTG TTCGGTCACG AACGCGGCGC GTTCACGGGG
GCCCTCGCGA CGCGCAAGGG CCGGTTCGAA CTGGCTGACG GCGGCACGCT GTTCCTCGAC
GAGATCGGCG ATATTTCACC CGCGTTCCAG GTCAAATTGC TGCGCGTGCT GCAGGAGGGC
GAATTCGAAC GGGTCGGCGG CGCGCGTCCG CTGAAGGTCG ATGTGCGGCT GGTTTGCGCC
ACCAACAAAA ACCTCGAGGA CGCCGTCAAG CGCGGCGAAT TCCGCGCCGA CCTTTATTAT
CGCATCACGG TGGTTCCGAT CTTTCTGCCG CCGCTGCGCG AGCGCGAAGG CGACATTCTG
CCGCTCGCCA ATGAGTTTCT GCACCGCTTC AACAGCGAGC AGAAAACCGA CCTTGTGTTG
ACGGCCTCTG CGATCGCCGT GCTGAAGGAA TGCAAATTCC CCGGCAATAT TCGCGAACTC
GAAAATTGCG TGCGCCGGAC GGCGACGATG GCGCCGGGCG ACGAGATCGA GCAAAACGAT
TTCGCCTGCC ACAATGATGG TTGCCTGTCA GCGATCTTGT GGAAAGGGTC CGACGCGCCG
CAAGTCAGCC ACAGGCACGT CGAGGCTCCT GTAGGCCCGG CGCGACTGCC GCCGGTCGAG
ACGGCGCGCG ACATCCGCCC GCCCGACGAC GCCGCAGCGC CTCCCCATTT GGCCGATGGC
GCCTTGCCGC CGGCGGGAGA GGGGGCGTTC CGGTCGGACC GCGAGCGGAT CGTCGACGCT
ATGGAGCGCG CCGGCTGGGT CAAGGCCAAA GCCGCGCGCG TGCTGGGTAT TACGCCAAGG
CAGATCGGCT ATGCGCTGAG AAAGCACAAT ATACGCGTGA AGAAATTCTA A
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| Protein sequence | MIHAQTPTAP QPIGRAADPG ETTLVGIYEI SKLLASVNRL EVSLAGVLTL LSSFLEMRHG
LIALLDKNGK PEIVVGSGWS EQNAKLYFDR LPERAIGQIV TTKMPLVVEN VYASPLFEGS
DLTGWGRADG EPFALIGVPI KDGDEVIGAL TVDRNNTNRT SVRFDHDVRF LTMIANLVGQ
TLRLQKLVAR DRERLMQENA RLEKSARPRS PETRFSGIEG IVGDSPAVRA VVKKIRIVAK
SRSTVLLRGE SGTGKELFAA AIHNLSPRSG KPFIKLNCAA LPESVLESEL FGHERGAFTG
ALATRKGRFE LADGGTLFLD EIGDISPAFQ VKLLRVLQEG EFERVGGARP LKVDVRLVCA
TNKNLEDAVK RGEFRADLYY RITVVPIFLP PLREREGDIL PLANEFLHRF NSEQKTDLVL
TASAIAVLKE CKFPGNIREL ENCVRRTATM APGDEIEQND FACHNDGCLS AILWKGSDAP
QVSHRHVEAP VGPARLPPVE TARDIRPPDD AAAPPHLADG ALPPAGEGAF RSDRERIVDA
MERAGWVKAK AARVLGITPR QIGYALRKHN IRVKKF
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