| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3499 |
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| Symbol | |
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| ID | 7092523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3843127 |
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| End bp | 3845229 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643466790 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_002363750 |
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| Protein GI | 217979603 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0569727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAA AACCTATTGA CGCGATGACG CTTGCGCAGG CGCGCCGCGA ACATTCGCGG
CTCGGCGCCG AGATCGCCGC GCATGATGCG CGCTATTATC GCGAGGACGC GCCGACGGTT
TCCGACGCGG AATATGATCG GCTGCGCCGC CGCTACGGCG AACTGGAGAG CGCCTTTCCC
GAACTCGCGA GCCCGGATTC GCTCACCAAA AAAGTCGGCG CCGCGCCATC GGAAAAATTC
GCGAAAATCC GCCACAGGAT TCCGATGCTC TCGCTCGGCA ATGTGTTCAG CGAGGCGGAA
GTCGAGGATT TTGTCGCGCG GGTCCGGCGC TTTCTTGGCC TCCCCACCGA GGCGTCGCTG
GCGATCACCG CCGAGCCGAA AATCGACGGG CTTTCCTGCT CGCTGCGCTT CGAGAACGGC
GAATTTGTCC AGGCGGCGAC GCGCGGCGAC GGTTTTGAGG GCGAGGACGT CACCGCCAAT
GTGCGGACCA TCGCGGAGAT CCCCGCGCGT CTCAAGGGGG AGCCGCCCGA AGTCCTCGAA
GTGCGCGGCG AAGTCTATAT GACCCACGCT GATTTCGCCG CGATGAATGT TCGCCAGCAG
GAGGCGGGCA AGCCGCTGTT CGCCAATCCG CGCAACGCCG CGGCCGGCTC GCTGCGCCAG
CTCGATCCAA ATATCACCGC CGGCCGGCCG CTGCATTTCT TCGCCTATGC CTGGGGCGAG
ATTTTGCCCG CGCCGCCGGC CGGCACGCAA ATGGGCATGG TCGCCGCGTT CAAATCCTAC
GGGCTCCCGG TCAATCCGCT GATGGTCCTT TGCCATTCGG CGGAAGAACT CATCGCGAAA
TACCGCTCGA TCGAGGAGAA GCGCGCCGCG CTCGGCTATG ACATCGACGG CGTGGTGTAC
AAGGTTGATT CTCTTGTGCT TCAGGAGCGG CTTGGCTTTG TTTCGCGCTC GCCGCGCTGG
GCCGTGGCGC ATAAATTTCC GGCCGAACAG GCGACGACGG TTTTGCGCGA TATCGAAATC
CAGGTCGGCC GCACCGGCGC GCTGACGCCC GTGGCGCGGC TCGATCCCGT GACCGTCGGC
GGCGTCACCG TCGCCAACGC CACGCTGCAC AATGAGGACG AGATCGCGCG CAAGGACGTC
CGCATCGGCG ACACGGTCAG GATCCAGCGC GCGGGCGACG TCATTCCGCA GGTGCTGGGC
GTCGTTCTGA ACAAACGCCC GGCCGAGGCG AAGCCTTATG TGTTTCCGGA TCATTGTCCG
ATCTGCGGCT CGGCCGCGAT CCGCGAGATC GACGAAAAAA CCGGCGTCGC CGATGTCGTG
CGCCGCTGCA CCGGCGGCCT CATTTGCCCG GCGCAGGCGA TCGAGCGACT GAAACACTTC
GCCTCGCGCA ATGCGCTCGA TATCGAAGGG CTGGGCGACA AGCAGATCGA GCAGTTTTAT
CATGACGGGC TGATCACGAA GCCCGCGGAT ATTTTTACGC TCGAAGCGCG CGACAAAGCC
GCGCTGAAAA AGCTGAAGGA CCGCGAGGGC TATGGCGAAA CCTCGACCCG CAATCTGTTT
CGGGCGATCG AACAGCGCCG CGCGCCGGCC TTGAACCGCT TTATCTATGC GCTTGGAATC
CGCCATGTCG GCGAAACCAA TGCGCGCCGG CTCGCCCGCC ATTTCGGCTC CTTTTCGGCG
CTGCGGGAGA CTGGCCGCGC CGCGGCGCCC GGCTCGGAGG CGCGCGCCGA GATCAATAAT
ATCGAGGGGG TAGGGGAAGT CGTCGCCGAG GCGGTCGCCG ATTTTTTTGC CGAGCCGCAC
AACGAGGAGG CGCTCGATGC GCTGCTCGCC CATGTGAACC CGCAGCCGAT GGAGGAGATC
GTCTCGGATA CTCCCGTCGC CGGCAAGACC GTGGTGTTTA CCGGCGCGCT GGAGCGCATG
ACGCGCGACG AGGCCAAGGC CATGGCCGAG CGTTTAGGCG CCAAGGTGGC GGCCTCGGTG
TCGAAGAAGA CCGACCTCGT GATCGCCGGG CCGGGGGCGG GGTCAAAACT CGCCAAGGCG
GCGGAGCTCG GGGTGGAGAC GATCAGCGAA GAGGACTGGC TGAAGCTGGT GGGGCGGGCA
TAG
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| Protein sequence | MSAKPIDAMT LAQARREHSR LGAEIAAHDA RYYREDAPTV SDAEYDRLRR RYGELESAFP
ELASPDSLTK KVGAAPSEKF AKIRHRIPML SLGNVFSEAE VEDFVARVRR FLGLPTEASL
AITAEPKIDG LSCSLRFENG EFVQAATRGD GFEGEDVTAN VRTIAEIPAR LKGEPPEVLE
VRGEVYMTHA DFAAMNVRQQ EAGKPLFANP RNAAAGSLRQ LDPNITAGRP LHFFAYAWGE
ILPAPPAGTQ MGMVAAFKSY GLPVNPLMVL CHSAEELIAK YRSIEEKRAA LGYDIDGVVY
KVDSLVLQER LGFVSRSPRW AVAHKFPAEQ ATTVLRDIEI QVGRTGALTP VARLDPVTVG
GVTVANATLH NEDEIARKDV RIGDTVRIQR AGDVIPQVLG VVLNKRPAEA KPYVFPDHCP
ICGSAAIREI DEKTGVADVV RRCTGGLICP AQAIERLKHF ASRNALDIEG LGDKQIEQFY
HDGLITKPAD IFTLEARDKA ALKKLKDREG YGETSTRNLF RAIEQRRAPA LNRFIYALGI
RHVGETNARR LARHFGSFSA LRETGRAAAP GSEARAEINN IEGVGEVVAE AVADFFAEPH
NEEALDALLA HVNPQPMEEI VSDTPVAGKT VVFTGALERM TRDEAKAMAE RLGAKVAASV
SKKTDLVIAG PGAGSKLAKA AELGVETISE EDWLKLVGRA
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