Gene Msil_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3313 
Symbol 
ID7090809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp3637956 
End bp3638585 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID643466620 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002363581 
Protein GI217979434 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0137945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTCG ACCCCAAGGG GCCGGGCCCT CGGATATCCA AAGAGAAGCG GGCGCCAGCC 
GCGGGGTCCC CGCGGAAACC GCGCGCGGAC GCAAAGCGGA ACCACGAGCG GCTGGTCGAA 
ATGGCGAAGG CCGCCTTTGC CGATGTGGGC GTGGACGTCG GCCTCGACGA GATTGCGCGC 
CGCGCCGGCG TCGGGATCGG CACGCTGTAC CGGCACTTTC CAAACCGCGA CGCGATTGTT 
GAGGCGGTCT ACCGCCGCGA AGTGCAGCAA TTGGCCGACT CGGCGGCGAG CCTCCTTCAG 
TCGCTGTCTC CTGGCGAGGC GCTCCGCGAA TGGATGCGGC TGTTCGTCGA CTATATCGCC 
ACCAAAAAGG TGATCGCGCC GGCGCTGGGG TCGATTGTCG GCGGGGCATC GGAGCTTTAC 
GCGTCCTCGG GCGCGCGGAT CACAGCGGCG ATGTCATTGC TGGTGGAGCG GGCGGGCGCG 
AGCGGCGACA TACGCGCTGA CGTCGATCCG AACGACCTTC TGCGCGCGCT CGTGGGCTTT 
ACCTATGGCA ATGCCGCTCC GGGCTGGGAG GCCAGCGCAA GGCGTCTGAT CGACATTCTG 
ATGGATGGGC TGCGGCCGCC TCGCACCTAG
 
Protein sequence
MSVDPKGPGP RISKEKRAPA AGSPRKPRAD AKRNHERLVE MAKAAFADVG VDVGLDEIAR 
RAGVGIGTLY RHFPNRDAIV EAVYRREVQQ LADSAASLLQ SLSPGEALRE WMRLFVDYIA 
TKKVIAPALG SIVGGASELY ASSGARITAA MSLLVERAGA SGDIRADVDP NDLLRALVGF 
TYGNAAPGWE ASARRLIDIL MDGLRPPRT