| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3240 |
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| Symbol | |
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| ID | 7090655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3554346 |
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| End bp | 3555221 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643466548 |
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| Product | squalene synthase HpnC |
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| Protein accession | YP_002363509 |
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| Protein GI | 217979362 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.113337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG TCGAACAGGC TCCCTCGAAG ACGCATAAGG GCGAAAATTT TCCCGTCGCC
TCGTTCTTGA TCGCGCCGGA GCGCCGGGCG CCGATTCTCG CCTATTACCA ATTTGCCCGC
GGCGCCGACG ATGTCGCAGA CAATGGCGCG CTGACGCCGC AGCAGAAACT CGACGGTCTC
GACCTGTTCG AGGCGACGCT GCTCGGCAAA AGCGAGGCGG TCCCCGCGGC GAAGCCGCTG
CGGGCCGCGC TCGCCGCCGA CAGGCGGCTC ACGGCGCGTC ATGCGCTGGA TCTGCTCACC
GCCTTCCGGA TGGACGCGGT CAAGACGCGC TATGCGAGCT TTGACGAACT GATGACCTAT
TGCGCTTATT CGGCGGCTCC GGTCGGACGC TTCGTTCTCG ACGTTCACGG CGAGAGCGAA
ACGACCTGGA CCGCCTCCGA CGCGCTGTGC AGCGCGCTGC AGATCATCAA TCATATGCAG
GATTGCGCAG CCGATTACCG CAATCTCGAT CGTGTCTATC TCCCGCAGGA TCTTCTAAAA
TCCTGCTGCG CGCCCGTCGA GGAGCTCGCG GCGCCCTCAG CGACGCCGCA TCTGCGGGCG
GCGCTCGACC GGCTCGTGGC CAAGACCGAG GTTTTGATCG AGCAGGGGGG AAAACTTCCT
GGCCAGGTGC GCGACTTCCG CCTGAGCCTG GAGACCGCCG TAATTGCGAC TCTGGCGAGG
CGGCTCAATC TGATCCTCAA GCAGCGCGAT CCCCTCAGCG AGGAAACGCA TCTGTCGAAG
CCCGCTGCGC TCGGCCTTGC CTGCGTTGGC GTCGTCTCCG CGCTGTCCGG ATTGGCGCGC
CGCTCGCTCG CCCCCGCGCC GAAGGCGGCG ACGTGA
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| Protein sequence | MSAVEQAPSK THKGENFPVA SFLIAPERRA PILAYYQFAR GADDVADNGA LTPQQKLDGL
DLFEATLLGK SEAVPAAKPL RAALAADRRL TARHALDLLT AFRMDAVKTR YASFDELMTY
CAYSAAPVGR FVLDVHGESE TTWTASDALC SALQIINHMQ DCAADYRNLD RVYLPQDLLK
SCCAPVEELA APSATPHLRA ALDRLVAKTE VLIEQGGKLP GQVRDFRLSL ETAVIATLAR
RLNLILKQRD PLSEETHLSK PAALGLACVG VVSALSGLAR RSLAPAPKAA T
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