Gene Msil_3124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3124 
Symbol 
ID7093784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3431885 
End bp3432634 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID643466434 
ProductHhH-GPD family protein 
Protein accessionYP_002363395 
Protein GI217979248 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGA TACGAATTCT GGACTCTGAC CAAGCGCTGG CCGAAGGGCT CGCGGAGCTT 
GGCCGCCTCG ATCCGGTGAT GGCGCGCCTC GTCGCCGAGG GCGCACAGCC GGTGCTGCGC
AAGCGCGAGC CAGGTTTTCA CGGCCTTGCC TGGATCATCA TGGGGCAGCA ACTCTCGGTC
GCAAGCGCCG ACGCCATCTG GCGGCGGCTG ATCGATCGTC TTGGGCCTTT GACGCCCTCA
GTGATCGAGG CGGCGACGGA TGAGGCGCTG AAGGCTTGCG GGCTGTCGGC GCCAAAAATC
CGCACGTTGC GGGCGATCGC CGAGGCGATT ACAAGCGGCG CTCTGCCGCT CGACGAACTT
GGCGTCATGC CGGCCGACGC GGCCCATGCC GCGCTGACGG CGGTGAAAGG CATCGGTCCC
TGGACGGCCG ACATCTATCT CATGTTCTGC CTTGGCCATT CTGACGCCTT CGCCGCCGGC
GACCTTGCCT TGCAGGCAGC CGCGCGTCTC GCCTATGGAA TGACGGCGCG GCCGGGCGCC
CCGGAACTTG TCGCGCTCGC CGAGCAGTGG CGCCCATGGA GAGCCGTCGC CGCCAAGGTG
CTCTGGGCGC ATTACAGGAT CGCGAAGGGC CGGCCGGGCG TGTCGGAGAG CGTCAAGCCT
GCGAAGGCGA GCCCGCCGAA AAAGAAGGCC GCTCCCAAAC CAAAGCTGTC GAGGCAGGCG
ACGAAGCGCA TCCACGCAAA GCTGAAATGA
 
Protein sequence
MATIRILDSD QALAEGLAEL GRLDPVMARL VAEGAQPVLR KREPGFHGLA WIIMGQQLSV 
ASADAIWRRL IDRLGPLTPS VIEAATDEAL KACGLSAPKI RTLRAIAEAI TSGALPLDEL
GVMPADAAHA ALTAVKGIGP WTADIYLMFC LGHSDAFAAG DLALQAAARL AYGMTARPGA
PELVALAEQW RPWRAVAAKV LWAHYRIAKG RPGVSESVKP AKASPPKKKA APKPKLSRQA
TKRIHAKLK