Gene Msil_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3116 
Symbol 
ID7093776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3420629 
End bp3423154 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content60% 
IMG OID643466426 
Producthypothetical protein 
Protein accessionYP_002363387 
Protein GI217979240 
COG category[L] Replication, recombination and repair 
COG ID[COG3598] RecA-family ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCATC ACTCTATACC GCCAAGCGTT GGCGAAGACA AGTCGTCTGC CGACGAACCA 
GCGGCGCCGG CGGCCCCGCC GCAGCACGGC TCGCCTTCGT CCAATCGCTT CAAAGAGCTA
TGGGATCGCG GATATCGCGC GCTAAGGCCG CTTATCCCGC ATGACGCGAC GATGAGCGAG
AGCTCCAACA TCCGGCCAGA GCTCATTGGC AAGATACCGG GCAAGCGCCT GGCAAACGGA
ACCTGGGTTG GCTTCCACGA CTGGCAAACA CATAGCACGA CGGACGCCGA TCTTGTCGAA
TGGGCGTCCT GGGGCGCCGG CGTCGGCCTT ATGACAGGCC TTGTGTCAAG CGTGCTGGCT
GTCGACATAG ACACGCTCGA TCACGGCCTT TCAGCGCGCG CGGCCGAACT CATGCGCGAG
ATGCTCGGGC CGGCGCGGCC CCGCGTCGGC CGGGCGCCGA AGGCGCTTTT CCTCTACCGC
TGTGCGCAGC CTGTCCCGTT CCTAAAGGTC AAGTTCGACG GCCCCGAGGG AAAGCGCGAG
CTCGTCGAGC TCAGCACAGA CCGACGCCAG ATCGTCATGC GCGGGACGCA TCCAAAGACG
GGAAAGCCTT ACAGCTGGCC CGAGGGGCTA CCGCCGTTCA AAGAGCTGAC AGAGGTAACG
CCCGAGCAAG TCGAGGCGTT CTTTCTTGAG CTCTCGCACG TCATGCCGAA CGCAGAGTTC
CGCGGGCGCA AGCTATCGGC AGGATCGGGC TCGGGCGGCG ACCAAACGAA GTTCACAGGG
TCGGCGGAAG CCGTTGCGCG CGCCGTGCGC AGCCTGCCGA ACACAGAGGC GCTCTACCCG
ACGCGCGATA GCTGGCTAGA CATGCTTTAC GCAATCAAGG CGGCGCTGCC GGACGATCCA
GGCGCTGCAG AGGCGCTGGC GCAAGAGTGG TCTGAGAAAT ACGACGGGCC CGACGGAAAC
GATCCAGATT ACGTCGCGCA AGAATGGCGC AAAATGGTTC CGCCATTCCG CCGCGGCGCA
AGCTGGCTTT ACGAGCAGGC AGAGCTGCAC GCCCCGAACG ACTTCGCTCG CGTCTCTGTC
TATTTCGACG TGATCGATGA GGACAAAGAC GACGCAATAG AGAGCCTTAG TTTGACGACC
GGCGCCGACC GCGACGTGCT TCGGGGGGCG CTGGAGGGAT TTGACGTCAA AGCCAAGTCG
CCGCAGGCCG TTGAGGCCTT TGGCCCCGAT GATGTCTGCG AAATAACTGA GGCGATAGAC
CCGAAACATC TTCCAACGCG CAAGTGGATC GTCAGCCCGT GGCTTATGGC CTGCACCGCG
AGCCAGGTTG TCGGAGCATC GAAGTTAGGC AAATCCGCAT TTATGCTGCG CCTCGCTTTG
GCCGTCGCGA CCGGAAAAGA AAGCATCTTG CGCGGCCCCG GCAATATATC ACCGGAGCGC
TTGCACAAGT GCGGACCGGT TATCGTTTAC AACGCCGAAG ACCCGCAGGC GGAAATGCAA
CGGCGGCTGA GTGCCGTTCA GAAATTTCAT GGCGTTATCG GCCGGGTGAA GCATGGAATA
ACACTCTGGT CGGGGAGCTC CCGCAGGCTA ATTGTCGCCG AACGCAAAGA CGGCAGAACA
AGCGCTGTCA CTGAAGGGCC AGGCTTCGCG AAGCTTAGAG AAATGATCAG GCGGAAAAAG
CCCACGCTCG TGATCCTCGA CCCGCTTGTA TCGCTAGTGG CCGGCATCGG CGAAAACGAA
AACGACGCGA TGGATGCGGC ATTCCGACTG CTCATCACTA TCGCGGCCGA AGAAAATACT
GCGATATTAA TCGTACATCA CACAGGCAAA ACCGAAAAAG CCGTCGACGA CATACATGCG
GGGCGCGGCG CCTCAGCCAG TGGCGGCGTC GTGCGCGGCA GTCTCAATCT CAACGAAGTA
TCGGAGAAAG ACCCCCTACG GGGAGGGCTT CCCCCTGGCC GATACATGCG CGCTGACATG
GGCGGAGCGA ATTACGGCCC CAAGATCGGC GGTCTGGTCT ATCGATTGAA AGTCGTACCG
GTCGGCAACG GGACTGCGGA TTGGTCACCA GAAACAGCCG ACGCACTCTT CAACGAAGAA
GACGCCGAGG CGTCGCTCCG GCGCCGCGGA GACACCGTCA TAGTTCACGA AATAATCGAT
GCGAGGAAAG CAGCCGCGGA GGCGAGCGCC GTTCGATCAG GTGAAGAAGA TGTGATGCGC
CGCAGCGTGG CGAGCGCAGC GTTGGAGGTT ATGGGGGGAA GCGCCCAGCT GAAAATCAGC
GGAGCGTATC TTGAATTGGG CAAGGCGCTA AAGCTTGCGG GAATAGCTAA AACCGACCGC
GAGCAAACAA TCAGAAACAC GCTCACAGAC AATTTGTCGG GGGATGGTGT TATCGTCGTC
AAAGACCACA AACGTATTCG CGTTTGGGCC GAAAAAGAAG GCGCAGATAA GGCTTCGCCT
TGGCTCCTAA GACATACAAG CGATGTCAAC GACGAGACCA TAGACGATGA CTTGGCCGGG
GCTTGA
 
Protein sequence
MGHHSIPPSV GEDKSSADEP AAPAAPPQHG SPSSNRFKEL WDRGYRALRP LIPHDATMSE 
SSNIRPELIG KIPGKRLANG TWVGFHDWQT HSTTDADLVE WASWGAGVGL MTGLVSSVLA
VDIDTLDHGL SARAAELMRE MLGPARPRVG RAPKALFLYR CAQPVPFLKV KFDGPEGKRE
LVELSTDRRQ IVMRGTHPKT GKPYSWPEGL PPFKELTEVT PEQVEAFFLE LSHVMPNAEF
RGRKLSAGSG SGGDQTKFTG SAEAVARAVR SLPNTEALYP TRDSWLDMLY AIKAALPDDP
GAAEALAQEW SEKYDGPDGN DPDYVAQEWR KMVPPFRRGA SWLYEQAELH APNDFARVSV
YFDVIDEDKD DAIESLSLTT GADRDVLRGA LEGFDVKAKS PQAVEAFGPD DVCEITEAID
PKHLPTRKWI VSPWLMACTA SQVVGASKLG KSAFMLRLAL AVATGKESIL RGPGNISPER
LHKCGPVIVY NAEDPQAEMQ RRLSAVQKFH GVIGRVKHGI TLWSGSSRRL IVAERKDGRT
SAVTEGPGFA KLREMIRRKK PTLVILDPLV SLVAGIGENE NDAMDAAFRL LITIAAEENT
AILIVHHTGK TEKAVDDIHA GRGASASGGV VRGSLNLNEV SEKDPLRGGL PPGRYMRADM
GGANYGPKIG GLVYRLKVVP VGNGTADWSP ETADALFNEE DAEASLRRRG DTVIVHEIID
ARKAAAEASA VRSGEEDVMR RSVASAALEV MGGSAQLKIS GAYLELGKAL KLAGIAKTDR
EQTIRNTLTD NLSGDGVIVV KDHKRIRVWA EKEGADKASP WLLRHTSDVN DETIDDDLAG
A