| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2976 |
|---|
| Symbol | |
|---|
| ID | 7093469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 3279294 |
|---|
| End bp | 3281672 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643466285 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002363249 |
|---|
| Protein GI | 217979102 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.126264 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTA TAGCGCAATC CGCTGGGACG CTGGAGCGTT TCGGCCTCGC CCAGAAAAGC
GAAAGTCTGA ACCGCCGTCT GAGCGATGTC ACGGCGCTGT CGCAATCGCT GCAGAAGCTG
CGCTCCGGCC ACCTTGCGCG CATCGGGGCG GCGCAAGGGG AGGCGCGCAA GGAAAACGCG
GCCAAACTCC GCGAGATCTG GTCGCCGCGC CGCGACGGCG CTGAGCTGTT GCGCGAGTTT
ACGGATTATG CGGTCGACTT TGCGCAGCGC TCCGTGTTGT TTCTCGACAT CATGCGCGAC
GTCGGCAATG CGTTCAACGA GCAAATGGCG GGCGAGCGCA CTCCTGTGCT CGTCTATGAT
TATGAGATGG CGCTCGACGG CCGCAAGATG AGCCGGCCGG TGAATTATGC GCTGGTCCGC
ATCATTCCGC CGGAGGGAAC GCCGGTCGAT CCGATGCGCC GGCCCTTCAT GATCATTGAC
CCGCGCGCCG GGCACGGCCC CGGCATCGGT GGTTTCAAGC TCGACAGCGA AGTTGGCGTC
GCCCTCGCGC ATGGCCACGC CGTCTATTTC GTGATTTTCT TTCCCGATCC CGAGCCAGGC
CAGACTCTTG CCGATGTCTG CGCGGCGGAA GGCCTCTTCG TGCGGGAAGT GTCGCGGCGT
CATCCCGGCG CCGACAAGCC GGCGATCCTT GGCAATTGCC AGGGCGGCTG GGCCGCTGCG
CTCGTCGCCG CCTCGAACCC CTATGTCACC GGCCCGATCG TGCTGAATGG CGCGCCGCTC
AGCTATTGGG CCGGCGAACG CGGCAAGAAT CCGCTCCGCT ACAAGGGCGG GCTCAAGGGC
GGCGCGATGC CGGTTCTGCT TTTGTCGGAT CTTGGCAATG GCCGTTTCGA CGGCGCCAAT
CTCGTCTTCA ACTTCGAATC CATGAATCCC GGCAACACAT GGTGGAGCAA ATATTACAAC
GTCTTCGCCA ATGTCGACAG CGAGGGGCCG CGCTTCAAGG CGTTCGAAAA ATGGTGGTCG
TCATTTTATG ATTTGAACGA AGCGGAGATC CGCTGGATCG TCGAAAATCT CTTCATCGGC
GACAAATTGG AGCGCGGCGA CGCCATGCTC GGCGGTCGTG GCGCGGTGGA TTTGCGGAAG
ATCAAATCGC CCATCATCAT TTTCGCCAGC AAGGGCGACG ATATCACGCC GCCGCCGCAG
GCGCTCGCCT GGATCGCCAA AGTCTATGGC GACGAACGCG AGATACGCGC GCGCGGCCAG
AAGATCCTCT ACATCGTGCA TGAGGATATC GGCCATCTTG GCATCTTCGT GTCCGCCAAG
GTGGCGCTGA AGGAGCACGA CCGCATCGTC TCGACGCTCG ACGCGATCGA GGCGCTGGCG
CCGGGCCTCT ATGAAATGCA GATCGAAAAG CTCGTCTCGG ACGCTACCGA GCCGAGCTAT
CTCGTCGGTT TCGAGGAGCG CACCCTCGCC GATCTCAATG CGTTCGACGA CGGCGCCGAG
GACGAGGCTT TCGAGGCCGT CGCGCGTCTT TCCGAATTTG GCGTTGATCT TTACGAAATG
CTGCTGCGGC CGACAATCCA GGCATTGGCG ACCCCGGCCT CCGCGCAGGC AATGGCGCGG
GCGCATCCGC TGCGCGCCCG CCGCGTGATT CTGTCGGACC GCAATCCTGT GATGCCGCTT
GTCGCGCCGC TCGCCGCCGC GGCGCGGGAA GCGCGGAAGC CCGTCGCGGC GGGCAATCCC
TTCTTCGCCA CGGAAAAGCT GACCGCGGCG ATGATCGAGC AGTCGATGAA TTTCTGGAGC
GATCTGCGCG GCGCGTTCGA CGAACTCGCC TTCTTCGCGA TCTATTCCAA TCCGCTGCTG
TCTCGCCTGA CGGACCGCGA TCGCTCGCCG CCCGCGAGCG ATCCGGCCGA TGGGTTGCGC
GAACTGCCGC TCGTGAATGA AGCGCTGGCG AATCTGTCGC GCGGCGGCTT CGCCGAGGCG
GTGATCCGCA TGCTGGTCCT GCTCGCGCGC TCGCGCGGGG AAGTGCGCCA GACCCGCCTT
GAACGATCCA GGGCCACGCT GCAGAATGCA GAGCCGTTCA AAAGCCTTGG CGAGAGCGAG
CGCACGCGGA TCATCCATGA GCAAACGCTG ATTATCGACT TCGAACCGGA GGCGGCGCTG
GCGACCTTGC CCGATCTTTT GCCCATTGAC GCGGACCGCC GGCGCGCGCT CGAACTCGTC
AAGGATATCG TTGGCGACGT CAGGGAAATG AGCGAACCGA CCATCGCCAT GTTCGCGCGG
CTGCGCCAAC GGCTGGGCGC GCCGGACGAC GGCGCCCTCG TCCGCAGCGA TTCGGCGCGT
CAGTTCCGCG AGCACGAAGT GCTTGAGACG CTGCAATGA
|
|---|
| Protein sequence | MKPIAQSAGT LERFGLAQKS ESLNRRLSDV TALSQSLQKL RSGHLARIGA AQGEARKENA
AKLREIWSPR RDGAELLREF TDYAVDFAQR SVLFLDIMRD VGNAFNEQMA GERTPVLVYD
YEMALDGRKM SRPVNYALVR IIPPEGTPVD PMRRPFMIID PRAGHGPGIG GFKLDSEVGV
ALAHGHAVYF VIFFPDPEPG QTLADVCAAE GLFVREVSRR HPGADKPAIL GNCQGGWAAA
LVAASNPYVT GPIVLNGAPL SYWAGERGKN PLRYKGGLKG GAMPVLLLSD LGNGRFDGAN
LVFNFESMNP GNTWWSKYYN VFANVDSEGP RFKAFEKWWS SFYDLNEAEI RWIVENLFIG
DKLERGDAML GGRGAVDLRK IKSPIIIFAS KGDDITPPPQ ALAWIAKVYG DEREIRARGQ
KILYIVHEDI GHLGIFVSAK VALKEHDRIV STLDAIEALA PGLYEMQIEK LVSDATEPSY
LVGFEERTLA DLNAFDDGAE DEAFEAVARL SEFGVDLYEM LLRPTIQALA TPASAQAMAR
AHPLRARRVI LSDRNPVMPL VAPLAAAARE ARKPVAAGNP FFATEKLTAA MIEQSMNFWS
DLRGAFDELA FFAIYSNPLL SRLTDRDRSP PASDPADGLR ELPLVNEALA NLSRGGFAEA
VIRMLVLLAR SRGEVRQTRL ERSRATLQNA EPFKSLGESE RTRIIHEQTL IIDFEPEAAL
ATLPDLLPID ADRRRALELV KDIVGDVREM SEPTIAMFAR LRQRLGAPDD GALVRSDSAR
QFREHEVLET LQ
|
|---|
| |