Gene Msil_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2860 
SymbolileS 
ID7093023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3143544 
End bp3146759 
Gene Length3216 bp 
Protein Length1071 aa 
Translation table11 
GC content63% 
IMG OID643466170 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_002363139 
Protein GI217978992 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.050777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGA TCGAGACGGC GCGCGGCGTT TTGCGCACGG CCGAAGGCAA GGGCGGGGGC 
GAGGCCAAGT CCGGCCCGGA TTATTCCAAG AGCCTCTATC TGCCGCAGAC CGACTTTCCG
ATGCGGGCCG GCCTGCCGAA GAAGGAGCCG GAGCTGCTCG CCCGCTGGCG GGAGATCGGC
CTTTACGAGC GCATGCGCGA GGCGGCGCGC GGGCGGCCGA AATTCGTCCT GCATGACGGC
CCCCCCTACG CCAATGGCGA CATCCATATC GGCCATGCGC TGAACAAGAT CCTCAAGGAT
CTCATCGCCC GCTCGCAGCA GATGCTTGGG GCCGACGCCA ATTATGTGCC GGGCTGGGAC
TGCCACGGCC TGCCGATCGA ATGGAAGATC GAGGAGCAAT ATCGCGCCAA GGGCCGCAGC
AAGGACGAGG TGCCGGTCAA TGAATTTCGC CGCGAATGCC GCGCCTTCGC CGAGCATTGG
GTCGAAATCC AGCGCGAACA GTTCAAGCGG TTAGGAGTCA ATGGCGATTG GGATCATCCC
TATCTGACCA TGACCTATCC CGCCGAGGCG ACGATCGCCC GCGAGATCAT GAAATTCGCC
GAGAACGGGC TGCTCTATCG CGGCTCGAAG CCGGTGATGT GGAGCGTCGT CGAAAAAACC
GCTCTGGCCG AAGCCGAGGT GGAGTACGAG GACCACGTCA GCGATTGGGT GTTTGTGGCG
TTTCCGGTGA AGCGCGTTGG CGCGGTCGGT CTGCCGGAAG ACATTGTGCC GGGCGTCGTG
TCTGCCCATC CCAACAACGA TGCTCTTGAA AAGGCATCTA TAGTCATCTG GACTACGACG
CCCTGGACAG TACCGGCTAA TCGAGCGATC AGCTTTTCAG CAAAAATTCC CTATGGGCTG
TATCGCATGA CGCTGGCGCC CGAAGGAAAC TGGGCTCCAA TCGGGGCAAC GTATTTGCTC
GCGGACGCCC TCGCTGATGG TGTATTCAAA TCTGCAAAAG TTGAGAGCTA TGAAAAGGTC
TGCGACGTTC CGCCGGACTA CCTTCGGGCT TTGACGGCCG CTCACCCATT CGCTGCGACT
ATTCCCGGCT ACGAATTCGC GGTTCCGCTT TTTGATGGCG ATCACGTTAC CGCCGACACC
GGCACAGGCT TCGTCCATAC CGCGCCTGGC CACGGCCGCG ACGATTATGA TATCTGGACG
TCACATAAGC GCTTTCTGGA AGAGCGCGGC ATCGACACGC GCATCCCGTT TACCGTCGAC
GCGGACGGCT TTTTGACGAG GGAGGCGCCG GGTTTTGCCC GCCATCGCGT CATCGACGAC
AAGGGCAACA AGGGCGACGC CAATGAGGCG GTCATCAAGG CGCTGATCGA GGCCGGCAAT
CTTCTCGCGC GGGGCAGGCT GAAGCACCAA TATCCGCATA GCTGGCGCTC GAAAAAGCCG
CTGATCTTCC GCAACACGCC GCAATGGTTC ATCGCGCTCG ACAAGGATTT CGAGCTTCCG
CAATATCCCC TTACTTCCCC ACAAAATCCC CTCACCCTGA GGAGCGGGCA AAGCCCGCGT
CTCGAAGGGC GAGGGGATGG CGCTAGCTTG GCGACCCGGG CGCCCTCGTC CTTCGAGACG
CCGCCTACTA CGGCGTCTCC TCAGGATGAG GGCTTTGCGC CGACCCTGCG CGCGATCGCG
CTTGCCGAGA TTGCCAAGAC CAAATGGGTC CCTGCCGCCG GCGAAAACCG CATCACCGGC
ATGATCGCCA ATCGCCCCGA TTGGGTCGTC TCGCGCCAGC GCGCATGGGG CGTGCCGATT
GCGATCTTTG TCAACAAGGA GAGCGGCGAC ATCCTGAAGG ATCGTCAGGT CAACGCCCGC
ATCACGGAGG CTTTTGCCGC TGAGGGGGCC GACGCCTGGT TCGCGGAGGG CGCCAAGGCG
CGCTTCCTCG GCAACGCTCA CAACCCCGAA GCTTTTGAAA AAATCGACGA CGTGCTGGAC
GTCTGGTTCG ATTCCGGCTC GACGCACGCC TTTACGCTCG ACGATCCGCA AAACTTTCCG
GGCCTTGCCG GCATCCGGCG CAAGCGCGAC GGCGGCGATG ACGAGATCAT GTATCTCGAA
GGCTCCGACC AGCATCGCGG CTGGTTCCAT TCCTCCCTGC TCGAATCCTG CGGCACGCGC
GGCCGCGCGC CCTTCGATCT CGTCCTGACC CATGGCTTCG TCCTCGACGA GAAGGGTCAG
AAAATGTCGA AGAGCCAGGG CAACGTCACC GCGCCGCAGA CGATCATCAA GGACGCCGGC
GCCGATATTC TGCGCCTCTG GGTCGCCGCC TCCGACTATT CCGACGATCT GCGCATCGGT
CCCGAGATCC TCAAGACCTT CATTGAGACC TATCGCAAGC TGCGCAACAC CATCCGCTGG
ATGCTCGGCA CGCTCGCCCA TTACGAGCCG GAGCGCGCCG TCGCCGTCGA GCAGATGGAG
GAGCTGGAGC GGCTGATGCT GCACCGGCTG AAAGAGCTCG ACGAGGATAT CCGGGACGCC
TACCAGCGCT TCGATCTGAA GCGCGTCGTG GCGCGGCTGT CGTCCTTCCT CAATTCGGAT
CTGTCGGCGT TTTATTTCGA TATCCGCAAG GATGCGCTTT ATTGCGAGCC GCCCTCCAGC
CTGAAGCGGC TGGCGGCGCT GACCGCGATC GAGCAGATTT TTCGCGCCGT CACGCTGTGG
CTGGCGCCCA TCCTCGTCTT CACCAGCGAG GAGGCGTGGT TGTCGCGCTA CCGTGAAAAA
ATCTCCATCC ATCTCGAAAC GCTGCCCGAT CTTCCGGACG AGTGGCGCGA CGAGGCGCTG
GTCGTCAAAT GGGGAAAGAT CCGCCGCATC CGCAGCGTCG TCACCGCTGC GCTGGAGATC
GAGCGCGCGC AAAAGCGCAT CGGCTCCTCC CTGGAAGCCG CGCCGCAGGT GTTCATCGCC
GATCCCGACC TGAAGAGCGC GCTCGAAGGC GTCGATTTCG CCGAAATCTG CATTGCGTCC
GATATTTCCA TCGCGGACGG CGAGGGGCCT ATTGACGCGT TCCGGCTCGA TGAGGTTCCG
GGCGTCGCCG TCGTTCCGCG CCGCGCCGAG GGGCGCAAAT GCGCCAGATC CTGGCGCATC
TCGCCGCTGG TCGGCTCCGA TCCCGACTAT CCCGACGTGA CGCCGCGCGA CGCGCGGGCG
CTGCGCGAAC TCCAGGCGGC GGGACTTTGG CCGTGA
 
Protein sequence
MNEIETARGV LRTAEGKGGG EAKSGPDYSK SLYLPQTDFP MRAGLPKKEP ELLARWREIG 
LYERMREAAR GRPKFVLHDG PPYANGDIHI GHALNKILKD LIARSQQMLG ADANYVPGWD
CHGLPIEWKI EEQYRAKGRS KDEVPVNEFR RECRAFAEHW VEIQREQFKR LGVNGDWDHP
YLTMTYPAEA TIAREIMKFA ENGLLYRGSK PVMWSVVEKT ALAEAEVEYE DHVSDWVFVA
FPVKRVGAVG LPEDIVPGVV SAHPNNDALE KASIVIWTTT PWTVPANRAI SFSAKIPYGL
YRMTLAPEGN WAPIGATYLL ADALADGVFK SAKVESYEKV CDVPPDYLRA LTAAHPFAAT
IPGYEFAVPL FDGDHVTADT GTGFVHTAPG HGRDDYDIWT SHKRFLEERG IDTRIPFTVD
ADGFLTREAP GFARHRVIDD KGNKGDANEA VIKALIEAGN LLARGRLKHQ YPHSWRSKKP
LIFRNTPQWF IALDKDFELP QYPLTSPQNP LTLRSGQSPR LEGRGDGASL ATRAPSSFET
PPTTASPQDE GFAPTLRAIA LAEIAKTKWV PAAGENRITG MIANRPDWVV SRQRAWGVPI
AIFVNKESGD ILKDRQVNAR ITEAFAAEGA DAWFAEGAKA RFLGNAHNPE AFEKIDDVLD
VWFDSGSTHA FTLDDPQNFP GLAGIRRKRD GGDDEIMYLE GSDQHRGWFH SSLLESCGTR
GRAPFDLVLT HGFVLDEKGQ KMSKSQGNVT APQTIIKDAG ADILRLWVAA SDYSDDLRIG
PEILKTFIET YRKLRNTIRW MLGTLAHYEP ERAVAVEQME ELERLMLHRL KELDEDIRDA
YQRFDLKRVV ARLSSFLNSD LSAFYFDIRK DALYCEPPSS LKRLAALTAI EQIFRAVTLW
LAPILVFTSE EAWLSRYREK ISIHLETLPD LPDEWRDEAL VVKWGKIRRI RSVVTAALEI
ERAQKRIGSS LEAAPQVFIA DPDLKSALEG VDFAEICIAS DISIADGEGP IDAFRLDEVP
GVAVVPRRAE GRKCARSWRI SPLVGSDPDY PDVTPRDARA LRELQAAGLW P