| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2558 |
|---|
| Symbol | |
|---|
| ID | 7093212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 2793870 |
|---|
| End bp | 2794436 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643465874 |
|---|
| Product | ATP-dependent protease peptidase subunit |
|---|
| Protein accession | YP_002362844 |
|---|
| Protein GI | 217978697 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.51701 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCGCTT CCGATTTCCC CGTCTGGCAC GGCACGACCA TCGTCCTCGT CAAGAAAGAC
GGGCGCACCG TCATCGGCGG CGACGGGCAG GTGTCGATCG GCCAGACCAT CGTCAAGGGC
AACGCCAAAA AGGTGCGCCG GCTCGCCAAG GGCGAGGTCA TTGGCGGCTT CGCCGGGGCG
ACGGCCGACG CTTTCACTTT GTTCGAACGG CTCGAGGCCA AGCTCGAACA ATATCCCGGC
CAGCTGATGC GCGCCTGCGT CGAGCTCGCC AAGGATTGGC GCACCGACCG CTATTTGCGC
CGGCTCGAGG CGATGATGCT CGTCGCCGAC GCCAAGGCCG CGCTGGTCCT GACCGGCAAT
GGCGACGTTT TGGAGCCCGA AGCGACCGAG CGCGGCTCGG TCATGGGCAT CGGCTCCGGC
GGAAATTACG CGCTCGCCGC GGCGCGGGCG CTGCTCGACA CCGACCGGGA CGCCGCGGCG
ATCGCCCGGC GCGCGCTCGA AATCGCCTCG GAAATCTGCG TTTATACCAA CCGAAGCGTG
GTGATCGAGG AGATCGCCTC GAATTAG
|
|---|
| Protein sequence | MTASDFPVWH GTTIVLVKKD GRTVIGGDGQ VSIGQTIVKG NAKKVRRLAK GEVIGGFAGA
TADAFTLFER LEAKLEQYPG QLMRACVELA KDWRTDRYLR RLEAMMLVAD AKAALVLTGN
GDVLEPEATE RGSVMGIGSG GNYALAAARA LLDTDRDAAA IARRALEIAS EICVYTNRSV
VIEEIASN
|
|---|
| |