| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2388 |
|---|
| Symbol | |
|---|
| ID | 7093940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 2602848 |
|---|
| End bp | 2603813 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643465710 |
|---|
| Product | alpha-L-glutamate ligase, RimK family |
|---|
| Protein accession | YP_002362680 |
|---|
| Protein GI | 217978533 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCTT CTCCTAAAGC AGCGCTTCTT GGAGAGGGCG CGCCAAAAAT CGCGATCGCG
GTCGATCTTT ATGACTGGCA CGCGCGCGAT CTGACCGCGG CTTTCGCCCG CGCCGGCGCG
CTGGCGACGC CGATAAGGCT GGCGCAATGC GGATTCGACA CGCAGCGCAA ACATGGGCTG
GTCATCCACG GCTTCGGGTC GGACCTGCCG GACGCGGTCT TCGTCCGCGC CATCGGTTCG
GGCTCGTTCG AAAGCGTGAC ATTGCGCCTC AGCGTGCTGC ACGCCTTGCG CGACCTCGGC
GTGCCCGTCG CCAATCCCGC CCGCGCGGTG GAAATCTGCG TCGACAAGGC GGCGACGAGT
TTTGCGCTGG CGCACGCCAA AATTCCAACG CCGCCGACAT GGGCCGCGCA ATCGACCGAT
GCGGCGCGGA AAATCCTTCG CCGCGAAATC TCGCGCGGGC CCCTTGTTTT AAAACCGCTG
TTCGGCGCGC AGGGTTTTGG CTTGAGGCTC ATACAGAGCG AGGACGATCT GCCGCCCATC
GAGGCGGTTG AATATGTCTA TTATTTGCAG CGATTCATTG GACCGCGCAA AGACGTCTAT
TCCGACATGC GGTTTTTTGT CTCGGACGGG AAAGTGATCG GCGCCATGAT CCGGCGCGCC
GCGAACTGGA TCACCAACAT CAAGCTTGGC GCGCGGCCGG AGTGGCTCGA GCCGGACGAC
GCTTTGACCG CGCTGGCGTT GCGCGCGTCT TCCGCCGTCG GCGCGCAATT CGCCGGCGTC
GACATTATTC TCGACGCCGA CGGCGCGCCG CAAGTGTTGG AAGTCAACAG CATGCCCGGC
TGGCGCGGCC TTCAGAAAGT GGCGCCTTTT TGCGTCGCCG ACCGGCTCGT CCGCGATTTT
TTAAAGCACG CCGGGCGGGC GCCTGTAGAA GAGGCGCCCA CATCGAGCGT CGAGCGCGTC
GCATGA
|
|---|
| Protein sequence | MPASPKAALL GEGAPKIAIA VDLYDWHARD LTAAFARAGA LATPIRLAQC GFDTQRKHGL
VIHGFGSDLP DAVFVRAIGS GSFESVTLRL SVLHALRDLG VPVANPARAV EICVDKAATS
FALAHAKIPT PPTWAAQSTD AARKILRREI SRGPLVLKPL FGAQGFGLRL IQSEDDLPPI
EAVEYVYYLQ RFIGPRKDVY SDMRFFVSDG KVIGAMIRRA ANWITNIKLG ARPEWLEPDD
ALTALALRAS SAVGAQFAGV DIILDADGAP QVLEVNSMPG WRGLQKVAPF CVADRLVRDF
LKHAGRAPVE EAPTSSVERV A
|
|---|
| |