| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2305 |
|---|
| Symbol | |
|---|
| ID | 7090289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 2499008 |
|---|
| End bp | 2499754 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643465628 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002362598 |
|---|
| Protein GI | 217978451 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0119494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGAC ATAGCCAGTT CAAGAACATC ATGCATAAGA AGGGCAAGCA GGACGCGATC
CGCTCCAAGC TCTTCTCCAA GCTCGCGCGC GAAATCACCG TCGCCGCGAA ACTCGGCCTG
CCCGATCCCA ATATGAATGC GCGTTTGCGC GCCGCCGTCA TCGCCGCGCG CGTCGAAAAC
ATGCCGAAGG ACAATATCGA GCGCGCCATC AAGAAAGCGT CCGGCGCCGA CGCCGAAAAT
TACGACGAGG TGCGCTATGA GGGCTACGGT CCCGGCGGCG TCGCCGTCAT CGTCGAGGCC
CTGACCGACA ACCGCAACCG CACGGCGGGT GAAATACGCT CCTACTTCAC CAAGGTCGGC
GGCGCGCTCG CCGAAACGGG CGCGGTGTCC TTCATGTTCG ACCACATCGG TCGCATCGAA
TTTCCGGCGA AAGTCGGCTC TGAGGAGGCG ATGCTTGAGG CCGCGATCGA GGCCGGCGCC
GAGGACGTGC TGTCAGGCGA AGAGGGCCAT GAGGTGCTGA CCTCGCTGGA AATGCTGCGC
GACGTCGCTT TGGCGCTTGA AGCGAAATTC GGCGAGCCGA CGCGGGCGAG CCTCATCTGG
AAGCCGCAGA ATACGATCAG CCTCGACGAC GAAACGGGCG AAAAGGTTCT GCGCCTGATT
GGCCTCCTTG AGGACAATGA CGACGTGCAG AATGTCTACG CCAATTACGA AGTGTCCGAG
GCGGTGCTGG CAAAGCTGGA GGCTTGA
|
|---|
| Protein sequence | MAGHSQFKNI MHKKGKQDAI RSKLFSKLAR EITVAAKLGL PDPNMNARLR AAVIAARVEN
MPKDNIERAI KKASGADAEN YDEVRYEGYG PGGVAVIVEA LTDNRNRTAG EIRSYFTKVG
GALAETGAVS FMFDHIGRIE FPAKVGSEEA MLEAAIEAGA EDVLSGEEGH EVLTSLEMLR
DVALALEAKF GEPTRASLIW KPQNTISLDD ETGEKVLRLI GLLEDNDDVQ NVYANYEVSE
AVLAKLEA
|
|---|
| |