| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2142 |
|---|
| Symbol | |
|---|
| ID | 7093363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 2316104 |
|---|
| End bp | 2317096 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643465467 |
|---|
| Product | putative sulfite oxidase subunit YedY |
|---|
| Protein accession | YP_002362443 |
|---|
| Protein GI | 217978296 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTATC ATCGCCGCAA AGGCTGGGAG ATTCCGGAGC GCGAGGCGAC GCCCGAAGCG
CTCTTTTTCG CGCGCCGCTC TCTCCTCAAG GCCGGCGTCG CCGCGGCGGC GCTGGCGGCG
GCTCCTTCCG CGCAGGCGTT CTCTTTGTTC GGCGGCGGCG ACAAGCCCGC CGCGCCGGAG
GCGCCCGATC AGACGCAAGG CCGTTATCCC GCAGGGCGCA ATGATCTGTT CAAGCTCGAC
CGCGATGTGA CGCCGGAGGA GATCAATTCC CACTACAATA ATTTTTACGA ATTCGGCTCG
GGCAAAGATA TTTTTGAGGC GGCGCAGGCG CTCAAGACTC GGCCCTGGAC CCTAAAAATC
GACGGTCTTG TCGAAGCCCC GAAGGAAATG GGGATCGACG ATCTCATTGC CTCCGCCCCG
CTCGAAGAGC GTCTTTACCG GCACCGTTGC GTCGAGGCCT GGGCGATGGC GATTCCCTGG
ACCGGCTTCC CGCTGAAACA CCTTGTCGAT CTGGCAAAGC CCCAGTCGGG CGCGAAATTT
GTGCGCTTCG AGACCTTTTT GGATCGCTCG ATGGCGCCGG GGCAGCGCCA GGTCTGGTAT
CCGTGGCCCT ATGGCGAGGG GCTGACCATG GCCGAGGCGT CAAACGATCT CGCCTTTCTC
GTCACCGGCG CCTATGGCAA GCCGCTCGGA AAGCAGTTCG GCGCGCCGCT GCGGCTGGCG
GTCCCGTGGA AATATGGGTT CAAGTCGATC AAATCGATCA CCAAAATTTC CTTCGTCGCC
GAGCGGCCGA AAACCTTCTG GGAGCAGCTG CAGGCGTCCG AATATGGCTT TTGGGCCAAT
GTGAACCCCG ACGTGCCGCA TCCGCGCTGG AGCCAGGCGA GCGAAGAGGT GCTGGGGACG
CATGAGCGCC GCAAGACGCA GATCTTCAAT GGCTACGGCG AATTCGTCGG CGGCCTCTAT
GTCGGGCTGG AGAAGGAGCG GCTTTACGTT TGA
|
|---|
| Protein sequence | MFYHRRKGWE IPEREATPEA LFFARRSLLK AGVAAAALAA APSAQAFSLF GGGDKPAAPE
APDQTQGRYP AGRNDLFKLD RDVTPEEINS HYNNFYEFGS GKDIFEAAQA LKTRPWTLKI
DGLVEAPKEM GIDDLIASAP LEERLYRHRC VEAWAMAIPW TGFPLKHLVD LAKPQSGAKF
VRFETFLDRS MAPGQRQVWY PWPYGEGLTM AEASNDLAFL VTGAYGKPLG KQFGAPLRLA
VPWKYGFKSI KSITKISFVA ERPKTFWEQL QASEYGFWAN VNPDVPHPRW SQASEEVLGT
HERRKTQIFN GYGEFVGGLY VGLEKERLYV
|
|---|
| |