| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1882 |
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| Symbol | |
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| ID | 7094161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 2042698 |
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| End bp | 2044845 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643465209 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002362189 |
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| Protein GI | 217978042 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGC TCATCGGGCT CGCGATTCAA CTCGTCCCCC AACTGTTGCA GTTGTTTTCG
GGAGACAAGG CCGGCCAGAT CGGACAGAAA GTCGCCGATG CGGTGACCCA GATCACCAAG
ACGGATTCGC CAGAAGAAGC GACGAAGATC GTCATGGAAG ACCCGAAGAT TAAAGCGGAT
CTTCAGGCCG AGCTGGCGCG GATCGCTTTC GCCGGCCAGC AGGCCGCATT TCAAGACGCC
CAAAACCAAC GCGAAGCGGA TTTGAAGGCG GATACGCTCG CCAACGAGAG CACGGCGGGC
GCGCGGCGTT TCGCCGAGGC CCTCGCGGCC ACGAGCCCGC TGATGCAATG GACGCCGACC
GTCATCTCTT TCATGGTGGT CATCGGATTC TTGGCGCTTC TGACGCTAAT GACGCTTGGC
AAGGCCGTGC TGCCGCCGCA GGGCGTCGAT CCCACCATCC TGCAGATCGT CAATATATTG
ATCGGCGCGC TCGCCGCCGC CTTCGCCACG GTGATGAATT TCTGGCTTGG CTCCTCGCTC
GGCTCGCGCG GCAAGGATCG CATGCTCGAA CTTCAGGGCG CGCAGGCGAT TTCGGCCGGG
CCTGCGCCTT CGCCTGCTCC GAGCGCGGCG GCGCCTCCGC TTGCCGGAGG GGCGCCGGGA
GGAGCGCCGA TCGGAGCGCC AAGCCCGGCG GCGCCGCGCA GCCGCCCGGA GGCGCCAGGC
CAGATGTCGC CTCAAGGCGG CTTCGCGCCG GGCGGCGTCG GCCCGCTCTC GCCGCAGCCC
GCGCCGAGCC TGGAACTGCC GCCGACGCAA CCAGTGACGC CAGCGCGCCC CGGCGTCGTT
AGCGAAACCA TGGCCGAACT GACGACACCG CATCGGCATT TTGCCGACGG CGTATCGTGG
GCGCTGACGG CGGCCGGCGT CGCCATCGAC GGAGCGGCGG CCATGGGCAC GCCGGGCGAG
CCTACGACGG TGCGCAAAAT CTGGACGAAG TTCGGCGCCC CTTGCGCCGC GGCGGCGCAA
AAATATGGCG TCCCGGTCGA ACTCATCGTC GCGACCATCG CGACGGAAAG CGGCGGCGAC
CCCACGGCGC GCCGGTTTGA ACCGAAGATC AACGACCAAA GCGTCGGCCT GATGCAAACC
CTCGTCGGCA CCGCCCGCGG CGCGCTGCGG CGCCCGGGCC TTACAGCCGA CGACCTGCTC
GATCCGGCGG TTTCGATCAA CGCCGGAACA GCCTATATCG CCGAGCAAAG GGGCTCGACG
CATTTCGATC CGCCGCTCGT CGCCGCCGCT TACAATGCGG GCTCGATCCG GCGCGACGAC
GCGCCCGCAA ACCGCTGGAA GCTGCTTTGC TATCCGACCG GCACGGGCCA TCACATCGAC
AAATATGTCG CCTTCTTTTC CGACTGCATG CGCGTCTCGG ACGCCGACGG ATGGAGCGGC
AGCGGCGCGA CCCCGAGCTT TGCCGATGAG CTCTCGGACC GCCCGGCCGC GCCGGCCCCG
GCCGGCCCTG CAGCGCCGTC CAGACCCGTT GACGAGTCGG GACCGGATTT TCCGCCGCCG
CCTGCCTTTG CGCCATTGAT CAGCATCGCC GACAGGCAAA AGCTGTTCGG CGCCTTCACT
TTCGCGCCTT CCCCACAACC GGGCGATCCC GAGCATATCA GGGTCACCAA TGATTGGGCG
GCCCGCAATA TCATTACGGT CGCCATCCCG CTGCGCTCCG TCTTGGGCAA GCCGGGACCG
CTCAAAATGC AGTTCCACCG GCTCGCCGCC GCGCAGCTGA CGGCGCTCTG GCTCGAATGG
GAAAAGCAGG GGCTGCTCGA CGAGGTGCTG ACGTTCGACG GCGCCTATAA TCCTCGCTTC
ATCCGCGGCA GCACGACCAC CCTCAGCAAT CACGCCTTCG GCACGGCGTT CGACATCAAT
GCGCGGTTCA ACCCGCTGAA AGCCCGGCCG GCGCTGAAAG GTCAGCCGGG ATCGGTGCGC
GATCTCGTCC AAATCGCCAA TCAATTCGGC TTCTATTGGG GCGGCCATTT CAGATCCCGG
CCAGACGGGA TGCATTTTGA AGTCGCGGAA TTGCTCGACG TCGCGCCGGA TGGCGGGACG
GGCGAAGAAC CTGTTGCAGC AGCCACAGCG CCGCTTGTCA CGGCGTAA
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| Protein sequence | MNPLIGLAIQ LVPQLLQLFS GDKAGQIGQK VADAVTQITK TDSPEEATKI VMEDPKIKAD
LQAELARIAF AGQQAAFQDA QNQREADLKA DTLANESTAG ARRFAEALAA TSPLMQWTPT
VISFMVVIGF LALLTLMTLG KAVLPPQGVD PTILQIVNIL IGALAAAFAT VMNFWLGSSL
GSRGKDRMLE LQGAQAISAG PAPSPAPSAA APPLAGGAPG GAPIGAPSPA APRSRPEAPG
QMSPQGGFAP GGVGPLSPQP APSLELPPTQ PVTPARPGVV SETMAELTTP HRHFADGVSW
ALTAAGVAID GAAAMGTPGE PTTVRKIWTK FGAPCAAAAQ KYGVPVELIV ATIATESGGD
PTARRFEPKI NDQSVGLMQT LVGTARGALR RPGLTADDLL DPAVSINAGT AYIAEQRGST
HFDPPLVAAA YNAGSIRRDD APANRWKLLC YPTGTGHHID KYVAFFSDCM RVSDADGWSG
SGATPSFADE LSDRPAAPAP AGPAAPSRPV DESGPDFPPP PAFAPLISIA DRQKLFGAFT
FAPSPQPGDP EHIRVTNDWA ARNIITVAIP LRSVLGKPGP LKMQFHRLAA AQLTALWLEW
EKQGLLDEVL TFDGAYNPRF IRGSTTTLSN HAFGTAFDIN ARFNPLKARP ALKGQPGSVR
DLVQIANQFG FYWGGHFRSR PDGMHFEVAE LLDVAPDGGT GEEPVAAATA PLVTA
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