| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1585 |
|---|
| Symbol | |
|---|
| ID | 7090942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 1712174 |
|---|
| End bp | 1713022 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643464911 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_002361896 |
|---|
| Protein GI | 217977749 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0856617 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCAC GCTCTCGCGC TTTCCTTTTG CTGGTCGCCC TGTCGTCTGC TGCGGCCTTC
GGGCTTGAAG TTAGGGCCGA GGGCGCCGAC GACGCGGCGA TCGAACTTGT CGATCCCGAC
GTATTGCGCG TTTGCGCCGA TCCGCGCGAT TTGCCGTTCT CGAACGAGGC CGGCGAGGGG
TTTGAAAACA AGATCGCGGA TCTGCTGGCG CAGAAGCTCG GCAAGTCGGT CGCCTACGTC
TATTATCCGA ACACAACAGG CTTCATCCGC AACACCTTGA ACGCCCATCG TTGCGATGTC
GTGATGGGAA TCCCGCAGGG CGACGATATC GTCCAGGTCA CCAACCCCTA TTATCGCGCC
TCCTATGCCG TGGTGACGAA GAAGGGGAGC GATCTCGAAA GCGTCGAGAG CCTGAGCGAT
CCGCGCCTCA AGGGAAAACA TATCGGGATT GTCGCAGGCA CCCCGCCGGC GACGATCATC
GCCCTCAATG GGCTGCTGCC CAACATCAAG TCCTATGCGC TCGTCGTCGA CACGCGGGCC
GACGCGCCGC CTGTGGAAAT GATCAAGGAT CTTGAAGCCG GCGACATCGA CATCGCCGTT
CTTTGGGGGC CGATCGCCGG AAACTTCGCC AAGAACGCCA AAACGCCGCT GGTCGCGACG
CCGCTGCTGC TCGAAAAGAT CGGGCCGCGC ATGGTCTATC GGATGGGCAT GGGCGTTCGC
CACTCCGATC AGGAGTGGAA GCGGACGCTG AATAAATTCA TCGCCGAGAA CCAGACGGAA
ATTGACGCCA TCCTGACGAA TTATGGCGTG CCGCTGCTGG ACGAGAACGA CAAGCCCAAG
ACGCACTAA
|
|---|
| Protein sequence | MTSRSRAFLL LVALSSAAAF GLEVRAEGAD DAAIELVDPD VLRVCADPRD LPFSNEAGEG
FENKIADLLA QKLGKSVAYV YYPNTTGFIR NTLNAHRCDV VMGIPQGDDI VQVTNPYYRA
SYAVVTKKGS DLESVESLSD PRLKGKHIGI VAGTPPATII ALNGLLPNIK SYALVVDTRA
DAPPVEMIKD LEAGDIDIAV LWGPIAGNFA KNAKTPLVAT PLLLEKIGPR MVYRMGMGVR
HSDQEWKRTL NKFIAENQTE IDAILTNYGV PLLDENDKPK TH
|
|---|
| |