Gene Msil_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1500 
Symbol 
ID7092006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1620210 
End bp1620959 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID643464827 
Productprotein of unknown function DUF81 
Protein accessionYP_002361813 
Protein GI217977666 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCCT TTGACGAAAA TCTTGGCCTT GGCGTTTTGA TCCTGGTCAC GGCGACGCTT 
TACGCCTCCG TCGGTCAGGC GGGCGCTTCG GGCTATCTCG CGGTGATGGG ACTGGCGGGC
CTTGACCCCG CCGTGATGAA GCCGACCGCC CTTGCTCTCA ACATCGTCGT GGCGCTGATC
GGAACGGCGC AATTCTGGCG CGCCGGGCTG TTCCGGTGGC GGAATTTCTA TCCCTTTGGC
GTACTCGGCT TTCCCTTTTC GATCCTCGGC GGCGCCATCC ACCTTCCGGG GCATGCCTAT
TATCCGATTG TGGGCGTCCT CCTGCTTCTC GCCGCTTTTC AGCTCGCGAG GCCTGCGCCC
CAGCGAGACG CCGGAAAGCT TCCGCCGACC GCGCCGCCAT TCCTCTTGTC GCTGCTGACA
GGCGCCGTAA TCGGCTTCGT GTCCGGCGTG ACCGGAACGG GCGGCGGCAT CTTTCTGGCG
CCCGTCATCT TGTTGATGAA CTGGGTCGAG ATACGCCGCG CCGCCGCTGT GACTGCCGCC
TATAATCTTC TGAACTCAAT CGCAGCGCTC GCCGGAGCCT ATGCGACGTT AAGAGCGCTT
CCCCCAGCGC TGCCGCTGTG GCTCGTCGCG GCGGCGATCG GCGGAGCAAT CGGCGCCACA
GTCGGCAACC GATATTTGCC GGACAAAGCG CTGCGCCACA TCCTCGCCGC TTTGCTCGCT
GTCTCCGGCG CGAAGCTCAT TCTGTTTTGA
 
Protein sequence
MLPFDENLGL GVLILVTATL YASVGQAGAS GYLAVMGLAG LDPAVMKPTA LALNIVVALI 
GTAQFWRAGL FRWRNFYPFG VLGFPFSILG GAIHLPGHAY YPIVGVLLLL AAFQLARPAP
QRDAGKLPPT APPFLLSLLT GAVIGFVSGV TGTGGGIFLA PVILLMNWVE IRRAAAVTAA
YNLLNSIAAL AGAYATLRAL PPALPLWLVA AAIGGAIGAT VGNRYLPDKA LRHILAALLA
VSGAKLILF