| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1378 |
|---|
| Symbol | |
|---|
| ID | 7091716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 1489423 |
|---|
| End bp | 1490337 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643464716 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002361705 |
|---|
| Protein GI | 217977558 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAAA TGCTGGAAAA TTTGATTGTT CGTCCGGAAG GAGAGTCGAG TGGCGCTATC
TCCGGCGATC TGCTGTCCCA TGTGCTGGCG CAGATCCGCC TTACCGGGGA TCAGGTCTTT
TCGCGGGCGC TTGCGGAGGC GGAGCAATTG GACATCGATG CTGGAGAGGC CCATGTCATC
GTGGTCACCG CTGGCGCGTT ACATATTGAA AGCGATAATC AGACGCGCGC CGTCATCGAC
ACAGGCGACT TGGTGCTGCT GCCTCGTGGC CCTGGTGAAT CGCGGCTGGT CGCGTCGCAT
CAACGCGTGA CGCTTGTCGT CTGCCGCTTT TGGTTCGATC CAGATAGCCT TCGAAGCATG
ATCTTCGCTC TACCGCAGCG CATTCATATC CAGCGCGCCG ATGCGGCAGG TTGGATTGAT
GGCATGCTGC GTTTCTTGAT GATCGAGGCA GGCGACATCC AGCCCGGCGC GGCCTTGATG
ATTTCCCGGA TCATCGACCT TCTCGTCATC CGCGTCCTGC GCAGTTGGGT CCATAAAGGA
CAGACGTCCG GGTGGCTCGG AGGACTGACC GATGCGCGCA TCGCCCGATC CTTGAAAGCC
ATCCACGAGA AGCCGATGCA GCGTTGGAGC ATCAACGCCC TGGCGGACCT TGTCGGCATG
TCCCGTTCCA GCTTTTGCGA ACGGTTCACG GCTCTCGTCG GACGCTCGCC GCTGCGCTAC
CAAAATGAAT GGCGCTTGGC GTTGGCGCGG GACATGCTCG CAAAGCGGGA CGCTCGCGTG
GGCGAGATCG GCTTGCGCAT CGGCTACGAG TCGGAGGCCG CCTTCAGCCG CGCCTACAAG
AAGCTCTTCG GCCATTCGCC GCGTGTAGAA TATGCCCTGA TGAATGAACC CGAGTCCGGG
AAACTGCCTG CATAG
|
|---|
| Protein sequence | MMEMLENLIV RPEGESSGAI SGDLLSHVLA QIRLTGDQVF SRALAEAEQL DIDAGEAHVI
VVTAGALHIE SDNQTRAVID TGDLVLLPRG PGESRLVASH QRVTLVVCRF WFDPDSLRSM
IFALPQRIHI QRADAAGWID GMLRFLMIEA GDIQPGAALM ISRIIDLLVI RVLRSWVHKG
QTSGWLGGLT DARIARSLKA IHEKPMQRWS INALADLVGM SRSSFCERFT ALVGRSPLRY
QNEWRLALAR DMLAKRDARV GEIGLRIGYE SEAAFSRAYK KLFGHSPRVE YALMNEPESG
KLPA
|
|---|
| |