Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1350 |
Symbol | |
ID | 7091688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 1454056 |
End bp | 1455237 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643464688 |
Product | hypothetical protein |
Protein accession | YP_002361677 |
Protein GI | 217977530 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3591] V8-like Glu-specific endopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.172226 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA GCAAAAGCGG CCTTGCAAAA ATGGCCGGCC CAGCGAGTTT ATCTGTGCTG ATTTGCGGAC TTGCCTCGCA AGTCCAGGCG CAGGCGGTGT CGTCGTCGCG CGTGCAGCCC CTTTCCGGCA ACCCCAATGG CGTCATCGAT TTCGCCAACG CAAAGCCAAT GCCGCTTCCT CGTATCGACA AGGCCCCCGC GCCAGGAGCG CCGCGCGCTC CCTCCGCGGC AAAAAAATCA TCGGTTGGCG TGGTTCCCGG CTCTGATTCG GGGGACGGCC AGACGAGCCC AATTCAGCTC GCGCCGGCGA AATCTTCGCT GAAGGCTGTA ACGCCTTCGC TTGGCGTGAC GCAGGCGAAT GGAGTGACGT CGCAGGCGAA TGGACAGGCC GCTCCCTATC ACCCTTACAC GATCGCCCAG GCGAGCGCGC TCAAGGACAA AACGCAGAAT TCCTTTCCCT ATCGCGCAGC AGGGAAGCTG TTCTTCCTGG ACAATGGCCA AACCTTTGTC TGCTCGGCGT CGCTCATCAA GTCCGGACTT CTTGTCACCG CTGCGCATTG CGTGGCAAAT TTCGGCACGG GCCAATATTA TTCCGACTGG GTCTATGTCC CGGCCTACGA TAATGGCAAG GCGCCTTATG GGAAATGGAA AGGCGTTCAG GCTTTCGCGC TGCCAAGCTA TGTGAATGGG AGCGATTCCT GCGCCACTCC CGGCGTCGTC TGCGAAAATG ACGTCGCGGT CATCACCCTC TACAAAGGCC GGTCGCTGCC GGGCAAGCGG ACAGGCTGGC TCGGCTACGC ATATGGCGGA TTTGGCGTAA ACCCATCAGG CCAGGCGCAC ATCACGCAGC TCGGATATCC CGTCGGCCTC GACAAAGGCG CTGTCATGGA GCGTGGCGAT TCGCAAAGCT ACATTGATCC GGCTAACTCC AACAACACGA TCATCGGATC CAACATGGAC GGCGGCTCCA GCGGCGGTCC TTGGATCCTC AATTTCGGCA TCGGCCCAAC GTTTACGGGC GAAGACGCCG GCGTCGATCC AGATCCCAAC ACCGTCGTCG GCGTGACCAG TTGGGGCTAC ACCGTCACCT CTCCCAAGGA GCAGGGAGCG TCGCCCTTCA CGAGCAATAA TATCGTCAAC CTTGTCAACG CCGCTTGCGC CGCCTCGCCG TTGGTGTGCT AG
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Protein sequence | MKFSKSGLAK MAGPASLSVL ICGLASQVQA QAVSSSRVQP LSGNPNGVID FANAKPMPLP RIDKAPAPGA PRAPSAAKKS SVGVVPGSDS GDGQTSPIQL APAKSSLKAV TPSLGVTQAN GVTSQANGQA APYHPYTIAQ ASALKDKTQN SFPYRAAGKL FFLDNGQTFV CSASLIKSGL LVTAAHCVAN FGTGQYYSDW VYVPAYDNGK APYGKWKGVQ AFALPSYVNG SDSCATPGVV CENDVAVITL YKGRSLPGKR TGWLGYAYGG FGVNPSGQAH ITQLGYPVGL DKGAVMERGD SQSYIDPANS NNTIIGSNMD GGSSGGPWIL NFGIGPTFTG EDAGVDPDPN TVVGVTSWGY TVTSPKEQGA SPFTSNNIVN LVNAACAASP LVC
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