Gene Msil_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1348 
Symbol 
ID7091686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1452521 
End bp1452994 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content65% 
IMG OID643464686 
ProductEndoribonuclease L-PSP 
Protein accessionYP_002361675 
Protein GI217977528 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.22562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA CGGAAGCAAA ACTGGCGGCG CTTGGCGTTA CTCTGCCGAC CCCGGCCGCG 
CCGGTCGCCA ATTACCTCGG CTATGTGGCG ACAGGCTCGC TGCTCGTCAT TTCCGGTCAA
CTGCCCTTTG GCGCCGACGG CAAGATCGAT CCCGCGCATG CGGGCAAGAT CGGCGCGGAA
GTCTCGGCTG AGGCGGCCAA GGCGGCGGCG CGGCTCTGCG TCATCAATGT TCTGGCTCAG
GCCAGGGCCG CCCTCGGCGA TCTCGACCGG ATCGTGCGGT GCGTGCGGCT CGGCGGTTTC
ATGAACGCCG GCCCCGGCTA TTTCAATCTG CCGCCTGTGA TGAACGGCGC ATCCAATTTC
ATCGTCGAGG TTTTGGGTGA GGCCGGACGC CACGCGCGCT CAACCGTCGG CGTCGCCGAA
CTACCGCTGA ACAGCGCGGT CGAAGTCGAG GCCATGTTCG AATTTTCGGC CTGA
 
Protein sequence
MSKTEAKLAA LGVTLPTPAA PVANYLGYVA TGSLLVISGQ LPFGADGKID PAHAGKIGAE 
VSAEAAKAAA RLCVINVLAQ ARAALGDLDR IVRCVRLGGF MNAGPGYFNL PPVMNGASNF
IVEVLGEAGR HARSTVGVAE LPLNSAVEVE AMFEFSA