Gene Msil_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1142 
Symbol 
ID7093905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1227460 
End bp1228179 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content65% 
IMG OID643464483 
Productimport inner membrane translocase subunit Tim44 
Protein accessionYP_002361473 
Protein GI217977326 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00140401 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAACT CATTCGACGT CTCGACCATC ATCTTCGCGC TTCTCGCCGC CTTCGTCGTA 
TGGAAGCTGC GCAGCATCCT CGGCGCGCGG ACGGGAACGG AGAAGCCGCC GAGAAACCCC
TTTATCGCCG GCGAACCCTC CGCCGCAAAG CGCCCCGGCG AAGGCGAGGG CAAGGTGATT
CCGCTGCCCG GCGCCTCCGC GCCAATCGCG CAGGCCGCAG CCGCCGATCC CTCCTCGCGC
TGGAAACCCC ATGCCGAGCC CGGCTCAAAA GCCTGGGCCG GCCTTGACGC CATCGCCGCG
GCCGACCGGT CTTTCGAGAT CAAATCCTTT CTCGAAGGGG CGAAGACGGC ATATGAAATG
ATCGTGATCG GCTTTGCCGA CGGCGACCGG CCGATGCTGC AGAATCTGCT CGACAAGAGC
GTCTACGACA GTTTCGTCAC CGCGCTCACG GAGCGCGAGA AGCGCGGCGA CAAGATCGAG
ACGTCATTCG TCGCCATCGA CAATGGGGCG ATCGCCGACG CCGAGCTGAA CGGCCGCATG
GCCGAGATCG CCGTCCGCTT CTCGGCGCAG ATCATCACGG CGACGCGCAA TGCCGCGGGG
ACAGTGATCG AGGGCAATCC CGAACAGGTC GTCGAGATCA ACGACACCTG GCGTTTCGCC
CGCGACGTTG GCGCGCGCGA TCCGAACTGG AGGCTCATCT CGACCGGCGA CCAACGATGA
 
Protein sequence
MQNSFDVSTI IFALLAAFVV WKLRSILGAR TGTEKPPRNP FIAGEPSAAK RPGEGEGKVI 
PLPGASAPIA QAAAADPSSR WKPHAEPGSK AWAGLDAIAA ADRSFEIKSF LEGAKTAYEM
IVIGFADGDR PMLQNLLDKS VYDSFVTALT EREKRGDKIE TSFVAIDNGA IADAELNGRM
AEIAVRFSAQ IITATRNAAG TVIEGNPEQV VEINDTWRFA RDVGARDPNW RLISTGDQR