Gene Msil_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1140 
Symbol 
ID7093903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand+ 
Start bp1226100 
End bp1226828 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content65% 
IMG OID643464481 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002361471 
Protein GI217977324 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00144314 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGAGC ATAAGACATC CTCGGGAAGC GGCGCAGAAG AGGAGGCCGG CGATTTGACG 
TCGCCGCCGA AGGATCCGCG CGAGGCCATC GTCGAGGCGC TGCTGGAGCT CGCGAGCGAG 
CGCAATTGGG ACGACATCAC GATCTCGGAC GTTGCGACGC GGGCCAATCT CTCGCTCTCC 
ACTTTTCGGG ATTATTTTCC CTCGAAGGGC GCGATTCTGG CCAGCTTCTT CCGCAAGATC 
GACAAGGCGG TTCTCGACGC GCCAAACGCG GATCTTGCCG GCGAGCCGGC GAAGGAGCGC 
CTGTTCGACG TTCTGATGCG CCGTCTCGAC GCGCTTGCCC CCTATAAGCT CGGCGTCGAG 
AGCATTTTCG ACTGGACGCG GCGCGATCCG ATCGCCGCCG CCGCCGTCAA TCGGCTCACC 
GTCAATTCGA TGCGATTCAT GCTGGAAGCG GCGGGAATTG AATCGGAAGG CGCCGTTGGC 
GCGGTCAAGC TGCAAGGGCT GGCCCTCGCC TGGGCGCGCA TCCTCCCCAT CTGGTTCCGC 
GACGACGACA GCGGCCTTGC GACGACTATG GCGGCCCTGG ATCGCGAACT GACCCGGGGC 
GCGAGCCTCG TCGCCCGCGC CGAAGATCTG AACCGTCTCG CCGCGCCGCT CTTTACCCTC 
ACTCGCTCCC TGTTCGACAG CCGCCGCACG AGCCGGCAGC GGGCCGAGAA GGAAGACGCG 
GGGATTTAG
 
Protein sequence
MNEHKTSSGS GAEEEAGDLT SPPKDPREAI VEALLELASE RNWDDITISD VATRANLSLS 
TFRDYFPSKG AILASFFRKI DKAVLDAPNA DLAGEPAKER LFDVLMRRLD ALAPYKLGVE 
SIFDWTRRDP IAAAAVNRLT VNSMRFMLEA AGIESEGAVG AVKLQGLALA WARILPIWFR 
DDDSGLATTM AALDRELTRG ASLVARAEDL NRLAAPLFTL TRSLFDSRRT SRQRAEKEDA 
GI