Gene Msil_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1127 
Symbol 
ID7093890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1215775 
End bp1216635 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content65% 
IMG OID643464468 
ProductNLP/P60 protein 
Protein accessionYP_002361458 
Protein GI217977311 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.111374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCG ACCGCCGCCT CACCCCCGCC CGACCCGATC TCGCCGCCGC CCATTTGCGC 
GGACAGGTCG AGGCGGATGA GTTTGTCGAG GGCGTCCGGG TCAGCATTCG CACGGGGCTG
GCCGATCTGA GGCCCGAGCC CGCGCCGGAT GTCTCGATCG ACACCCAGGC GCTTTATGGC
GAGACGGCGC TTCTCTATGA AGACCGCGAG GGTTTTGGCT GGGTGCAGCT CGAACGCGAC
GGCTACGTCG GCTATCTGTC GATGGCCGAA ATCGGCGCGG CCGGGAACGC CGCAAGCCAC
AGGGTCAAGG TCAACCGCAG CTTTATCTAT CCCGCGCCCA ATATGAAGCT GCCGCCGATC
GGCGCCCTGC CCCTTGGCGC GCGGGTCGGC GTCGTCGAAG CGGGCGATTC CTTTGCGCGG
CTTGGCGAAG GCGGGTTTGT CTTCGCCGCC CATCTTTCCC CCATCGAGGA AAAGGAGAGC
GACTTCGTTG CCGTCGCGGA AAAACTCCTC CATACGCCCT ATCTTTGGGG CGGCAAGTCG
AGCCTTGGCC TCGATTGCTC CGGCCTCGTG CAGATCGCGC TCGACGCGGC GGGCGTAAAA
TCGCCGCGCG ATACCGATTT GCAGGAAAAG GCGCTCGGAC ACGCCCTGCC CATCAATGAA
GATTTATCAG GGCTTCGGCG CGGCGATCTC GTCTTCTGGC GCGGCCATGT CGGGATCATG
CGCGACGCTG AGACGCTGCT GCACGCCAAT GCGCATCACA TGATGGTCGC GAGCGAGACT
TTGCGCCACG CCCGCGACCG GATATTGGCG AAGGCGGGGC CGCCGATCAG CTCGATCCGG
CGGCTTTTCC CGGCGGTCTG A
 
Protein sequence
MPFDRRLTPA RPDLAAAHLR GQVEADEFVE GVRVSIRTGL ADLRPEPAPD VSIDTQALYG 
ETALLYEDRE GFGWVQLERD GYVGYLSMAE IGAAGNAASH RVKVNRSFIY PAPNMKLPPI
GALPLGARVG VVEAGDSFAR LGEGGFVFAA HLSPIEEKES DFVAVAEKLL HTPYLWGGKS
SLGLDCSGLV QIALDAAGVK SPRDTDLQEK ALGHALPINE DLSGLRRGDL VFWRGHVGIM
RDAETLLHAN AHHMMVASET LRHARDRILA KAGPPISSIR RLFPAV