Gene Msil_0995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0995 
Symbol 
ID7093674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1076568 
End bp1077350 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content62% 
IMG OID643464334 
Productpentapeptide repeat protein 
Protein accessionYP_002361326 
Protein GI217977179 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0411427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC GTCTTCGCTA TGTTGTGATC GCGGCGCTTG CATCAACGCC TGTGGGCGTG 
TTGCGCGCGC AGGACATGAT GAGCCAGGTC GATCTGGCGA GCCCCATGTT CACCAAGGCG
GAAATGACTC GCGCCGATGT GGAGGCGGCG CTCAAGGCGG CCGGAGACCG GCCGGATTTT
TCCAACAAAA GCCTCAACGG CCTCGATCTG TCGAATCTCG ATCTCTCCGG CGTCAATTTC
CGCGCGGCGC GGATGAACAA CACGAATTTT TCCGGCGGCA AGCTCGATGG CGCCGTGCTC
GATCAGGCCT GGGCGCTGAA AGCGAATTTT GCGGGCGCGA GCCTCCGCGG CGCCGGCCTC
TTCGCCAGCC AGCTGCGCGG CGCCAATTTT GACGGCGCCG ATCTGTCCGG GTCTCGCATC
ACCGCCGACA TGTCCGGAGC GACGATGCGC AACGCCAAAT TCATCGGCGC CAATCTCTCC
GCCGACATGC AGAACCAATC CATGGGCCTC ATCCGGGCCG TGCTGAAATC GGCCGATCTC
AGCGGGGCGG ATTTTTCGGG CGCCAATCTG TCGCGCGACG ATCTGCAGTT TTCCAAATTC
AATGGCGCGA ATTTCACCGG CGCGTCGCTG GCCGGGGCCG ACGCCAGCGG CGCTGATTTT
CGCGGCGCGA TTTTCAAAGA CGCCGACCTG ACGGGCCTCG ACATAAGCTC ATCGCGGATC
GACGCGGGGC AGTCCGGCGC CTTTGCAAAC GCAAAGAATT TTTCGCGTGT CCTGACGGAG
TGA
 
Protein sequence
MNVRLRYVVI AALASTPVGV LRAQDMMSQV DLASPMFTKA EMTRADVEAA LKAAGDRPDF 
SNKSLNGLDL SNLDLSGVNF RAARMNNTNF SGGKLDGAVL DQAWALKANF AGASLRGAGL
FASQLRGANF DGADLSGSRI TADMSGATMR NAKFIGANLS ADMQNQSMGL IRAVLKSADL
SGADFSGANL SRDDLQFSKF NGANFTGASL AGADASGADF RGAIFKDADL TGLDISSSRI
DAGQSGAFAN AKNFSRVLTE