Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0720 |
Symbol | |
ID | 7091952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 791752 |
End bp | 792522 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643464056 |
Product | Rhomboid family protein |
Protein accession | YP_002361053 |
Protein GI | 217976906 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCTG CGAGACAACC GATCTTTAAC GTGCCGGCGG TCGTGCTCGC CCTTGTTGCG ATCCTTGTCG TGATCGAGGC CGTCTGCGAC GCCATTCCGC CGCTGGCCCA TTTCAAGATC ATCGCGGCCT TCGCTTTCGT GCCGGGACGC TTCACCTTTG CGTTCGACCC CGATCTCGTC AACGCGGCGT TCAACACGAC CGCGGCGACG AGCGAGAGCG CCGCCGAGCT CGCGACCTTC TTTCTCGGCG ACGGCAAGCC TTTGTGGTGG ACGCCGCTGA CCTACGCCTT CCTGCATGGC GGCTGGGCGC ATGTGGGCAT GAACAGCCTG TGGCTGGTCG CCTTCGGATC GGCCGCCGCG CGCCGGTTTG GAACGGGGCG GTTTCTGTTT TTTTGCGCGG TCTGCGCGAT CGCCGGCGCG CTGGCGCATT TCCTGACCCA TATGGCCGAT CTGCAGCCGG TGGTCGGCGC TTCCGCGGTG GTTTCCGGCG CGATGGCGGC GGTGGTCCCG TTTCGCCTTC CAGCCAGGGG CGCCGCTCGG CGCCGCGCTG ATGTTCGCCG AGCGCCCGGC CGGCGCCTAT CGGCTGCCGG CGTTGCCGCT GCGGGAAATC GTCTCGAACC GCAACGCCAT TACCTTCGTC GTGCTGTGGT TTCTCGCCAA TTTCCTGTTC GGCGTGTTTC CCGCGACGAT CGGCCTGACC GACGTCTCCG TCGCCTGGGA GGCGCATGTC GGCGGATTTT TGGCTGGGCT GCTGGCGTTC AAATGGTTTG A
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Protein sequence | MTPARQPIFN VPAVVLALVA ILVVIEAVCD AIPPLAHFKI IAAFAFVPGR FTFAFDPDLV NAAFNTTAAT SESAAELATF FLGDGKPLWW TPLTYAFLHG GWAHVGMNSL WLVAFGSAAA RRFGTGRFLF FCAVCAIAGA LAHFLTHMAD LQPVVGASAV VSGAMAAVVP FRLPARGAAR RRADVRRAPG RRLSAAGVAA AGNRLEPQRH YLRRAVVSRQ FPVRRVSRDD RPDRRLRRLG GACRRIFGWA AGVQMV
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