| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0697 |
|---|
| Symbol | |
|---|
| ID | 7091928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 762912 |
|---|
| End bp | 763805 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643464032 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_002361030 |
|---|
| Protein GI | 217976883 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGAC GACGTCCGCC CCGCGCTGCA ACGCTAGCCG CCGCCGCTCT GTTCGCGCTC
CACGCGCCGG CCGGCGGCGC AGCGGCGCCT GCGCCAAAAT CTTGCGGCCC CGACGCGCTG
GGGGTCAGCC GCACCCTCGC CTTCAGCGCC AGGGGCGGCC TCGCCATCGG CTTCAAGAGC
TATCCGAAGA CGCTGGATCT CGCGGATCAT GAAGTCGTGC TGACATTCGA CGACGGCCCG
GCGGCGGGGA CGACGGCGAA AATTCTCGAC GCTCTCGCCG CCGAATGCGT CAAGGCGACG
TTTTTCCTCA TCGGCCGCAA CGCGCGAGGA CTCCCCGCCC TCGTCCGCCG CGAGGCTGCC
GAGGGCCACA CCATCGCCCA TCACAGTTTT TCGCACCCCG ATATGCGCCG CTTAAGCGAG
GCGGCGGCCA AGAAAAATAT CGACGAAGGC TTTGCCGCCG ACGATATGGC CGCCTATGGC
GCCGCGGCGT CGGAGCCGCG CACGCCGTTC TTCCGCTATC CCGGCTTTTC CGACACGCCA
ACGCTGAACG GCTGGCTGGC CTCGCGCAAC ATTGCGGTGT TCGGTGCGGA TCTTTGGGCC
TCGGATTGGA ACAAAATGAC GCCGCAGGAG GAACTGGATC TCGTCATGTC GCGGCTTGAG
GCGGCAAAGG GCGGCATCTT GCTCCTCCAC GACATCAAGG CCGAGACGGC GGCGATGCTG
CCGCAGCTGC TGCGCGAGAT GAAGCGGCGC GGCTTCCGCA TCGTGCATAT CCGGCCGGGC
GACGATCCGC CGCCGCTGCG CGACGCGCCC GCGGGCTGGT CGTCGGAGAC CGAGAAAATT
GCAGCGGGAT TTTATGCCGG CAAGCCGGCG CCGCGCGCCG CCAGGCGCCC CTGA
|
|---|
| Protein sequence | MSRRRPPRAA TLAAAALFAL HAPAGGAAAP APKSCGPDAL GVSRTLAFSA RGGLAIGFKS
YPKTLDLADH EVVLTFDDGP AAGTTAKILD ALAAECVKAT FFLIGRNARG LPALVRREAA
EGHTIAHHSF SHPDMRRLSE AAAKKNIDEG FAADDMAAYG AAASEPRTPF FRYPGFSDTP
TLNGWLASRN IAVFGADLWA SDWNKMTPQE ELDLVMSRLE AAKGGILLLH DIKAETAAML
PQLLREMKRR GFRIVHIRPG DDPPPLRDAP AGWSSETEKI AAGFYAGKPA PRAARRP
|
|---|
| |