| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0613 |
|---|
| Symbol | |
|---|
| ID | 7093692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 663624 |
|---|
| End bp | 665111 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643463946 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_002360947 |
|---|
| Protein GI | 217976800 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.00466387 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCGG CGTCGCCTCG AAGCTGTGCG AAAGCCGCCG TGCGCGGCTT TGCGGCCGGC
GCTGCCCTGA AGCTCGAAGA TGATCCAACG CAATATGGCG ATTTTCCGCA GGATTTCTGG
GCCACGGAGT TTGACGGCGC CGAGCTGAAT TTTGCGGCGC GCGACGAATC TGGCGCCGGC
GGCCTGAGCG ACGCGGAGTC GGAAATCGCC GTCAGCGCGG ATGACAGGCT CGCCGCCGAT
CGTCCGGCCG GCTCCTTCTT TGACAGAGGC GTGATCTTCG TGCTGGCCGC ATCGCTTGTG
GCGCATGCCT GCTTGCTGCT CGCTTTTCTC TGGGCAAGCC CCTGGGACAC ACCGCCCGAG
GCGTCAAAGG AAACGCCGAT CGAAGTCGTG ATCGAACAAC CAAAGCCCGA CCCCGCGAAA
GAAGCCGCTG CGAAGCAGTC CGCGAACCGG CAGGCTGCAA GCAAGCAGGC CGAAGCCAAA
GCCGCGGAAG AACAGGCAAG GCAAGCCGCG GCCAAGGCGG CCGAGCAGGC CAAGGCTGCG
GAGCAAGCCA AGGCGACGCA GGCGAAGCAA CAGGCCGATC AAGCCGCTAA AGCGGCGGAG
GCCGCTGAAG CCAAAGCCGC ACGGGACGCC GCTGCGGCGA ACGAGGCGAA AGCCGGGGCG
GCTAAAGCTG AATCGGCTAA AGCTGAATCG GCCAAAGCCG AGGCGGCCAA AGCCGAGGCG
GCAAAGGCGG CTCAGGCCAA GGCTGACGCG GCTAAGGCTG AAGCAGCCAA GGCTGACGCG
GCGAAGGCTG AGGCGGCGAA GGCCGAAGAA GCCAGGGCTG CGCAAATGAA GGCTGCCGAA
ACGAAGGCTG CTGAAGCCAA GGCCGCCGCA ACCAAGGCTG CGGAGGAAAA AGCCGCTGCC
GCGCAGGCTG CAGCCGAAAA GGCCGAACAG GCGAAAGCGG CAAGGGCGCA GGCGAGGCAG
GCCGAGCAGG CGAGCGCCGA GCAAAAACGC GCCGAACGGG CGGAAAAGAA AGCCGCGGCG
GTGGCCAAGA GCGCTGCAGC CCGGGAGGCA GCGGCGGCCA GCGCCAATCG CCAGGGCGCG
CCGCTGCAAT CCGCCGGGTT TGGCGCGTCG AAGAGCGGGC AGGAGATGCA GCTTCCCTTC
GACAACGGGC CGCCCATTTT CCGCGCCGTC GCCGTGCCTT TGCCGACCGA GGGCGGCGAC
GAACAGATGA GCTACAAGGT CATCGTGTTC GGCATGCTGG AGCGCGCCAA GCAATATCCG
CCGGCGGCGC GCGAGCGCGG GGCGCGGGGC AGCGCCGTGG TCTCTTTTAC GCTCGAGGAA
TCGGGCGAGC TCGCCAATGT GTCGCTAATG CGCTCAAGCG GCGATTCCGA CCTCGATATC
GAGAGCCTCG CGCTGGTTGC GAGAGCCTCG CCTTTCCCGA AGCCGCCGGA GGGGGCGCAG
CGCTCCTTCG CCGCCGAAAT CACTTTCGAT CTGCGGGACG AACCCTGA
|
|---|
| Protein sequence | MHSASPRSCA KAAVRGFAAG AALKLEDDPT QYGDFPQDFW ATEFDGAELN FAARDESGAG
GLSDAESEIA VSADDRLAAD RPAGSFFDRG VIFVLAASLV AHACLLLAFL WASPWDTPPE
ASKETPIEVV IEQPKPDPAK EAAAKQSANR QAASKQAEAK AAEEQARQAA AKAAEQAKAA
EQAKATQAKQ QADQAAKAAE AAEAKAARDA AAANEAKAGA AKAESAKAES AKAEAAKAEA
AKAAQAKADA AKAEAAKADA AKAEAAKAEE ARAAQMKAAE TKAAEAKAAA TKAAEEKAAA
AQAAAEKAEQ AKAARAQARQ AEQASAEQKR AERAEKKAAA VAKSAAAREA AAASANRQGA
PLQSAGFGAS KSGQEMQLPF DNGPPIFRAV AVPLPTEGGD EQMSYKVIVF GMLERAKQYP
PAARERGARG SAVVSFTLEE SGELANVSLM RSSGDSDLDI ESLALVARAS PFPKPPEGAQ
RSFAAEITFD LRDEP
|
|---|
| |