Gene Msil_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0543 
Symbol 
ID7091604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp603449 
End bp604150 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content66% 
IMG OID643463873 
ProductdTMP kinase 
Protein accessionYP_002360877 
Protein GI217976730 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAA CCAATGATCC CGCGCCGTCG TCCCCTCGGC GGGGCAGGCT GATCACGCTT 
GAAGGCGGCG AGGGCGTCGG CAAATCGACG CAGATTGGCC GTTTGCTGCA GCGCTTGCGG
GACGAAGGAA TTGAAGCTGT CGCAACGCGA GAGCCCGGCG GCTCCGAAGG CGCCGAAATT
CTTCGCCGGG TGCTGCTGTC GGGGGTCGTC AAGCCGCTCG GCCCCGCCGC CGAGGCCATT
CTCTTTGCGG CGGCGCGGAT CGATCATATC GACGCCCTGA TCGAGCCGGC TCTTGCGGCG
GGAATTTGGG TCGTGTCCGA CCGCTTCGCC GATTCGACGC GCGCATATCA GGGCGGCGCG
GGCTCGCTCG ATAACCGCCT GATCAATGCG TTGGAGCGAA CGGCCCTTGG CGATTTGCAG
CCGGACCTCA CTTTGATCCT CGATCTTCCG CCAGGGGAGG GGCTGCGCCG CGCCGCCGCC
CGCCGCAAAG ACGCAGACGG CGTCGATCGC TTCGAGGGCG AGGATCTTCG CTTTCATGAG
GCGATCCGGG CCGCATTCCT GACGATCGCC GCTGACAATC CGCAGCGATG CGTCGTCGTC
GACGCCAGCG CTTCCGAGGT TGAGGTGGCC GCAGCGATCT GGACAGCAGT GTCGGACCGC
CTCCTCAAGG AGCGGGAGCT CGATCGCGCG CATGGCTCCT AA
 
Protein sequence
MSQTNDPAPS SPRRGRLITL EGGEGVGKST QIGRLLQRLR DEGIEAVATR EPGGSEGAEI 
LRRVLLSGVV KPLGPAAEAI LFAAARIDHI DALIEPALAA GIWVVSDRFA DSTRAYQGGA
GSLDNRLINA LERTALGDLQ PDLTLILDLP PGEGLRRAAA RRKDADGVDR FEGEDLRFHE
AIRAAFLTIA ADNPQRCVVV DASASEVEVA AAIWTAVSDR LLKERELDRA HGS