Gene Msil_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0539 
Symbol 
ID7091600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp599094 
End bp599891 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content63% 
IMG OID643463869 
Productbeta-lactamase domain protein 
Protein accessionYP_002360873 
Protein GI217976726 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTG CGATCACGAT TCTCGGCTGT GGATCGTCCG GCGGCGTGCC GCGCGTCGCC 
CAAGGGTGGG GCGCCTGCGA TCCGCTAAAT CCGCGCAACA GACGCCGCCG CTGCTCGATC
TTTGTCGAAC AGACCGGGCC GGACGGCGGC AAGACGGCGG TGCTCGTCGA CACCTCGCCG
GACCTGCGCG AGCAATTGCT CGATCTCGGC GCGACGCGGC TCGACGGCGT GTTGATGACG
CATGCCCATG CCGACCATAC GCATGGCATC GACGACGTCC GGCCGCTTGT CATTTCGGCG
CGGCATAAAA TCAACATTTA CATGGATGAG ACGACGTCGG CGGTCGTTCG CTCCAATTTC
AACTATATTT TCGTCACCCC GCCGGGCAGC CAATATCCGC CGCTTTTAAC GGAACACCGC
CTTATCCCGG GCGCGCCTGT GGCTGTCAAC GGTCCGGGCG GTCCGTTGCG GGCGACGCCG
TTCCGGCTCG AACATGGCGA AATCGACGCG CTCGGCTTTC GCTTCGGCGA CATCGCTTAT
TCCCCGGACC TCAATGGAAT TCCCGCCGAG AGCCTTGGCT ATCTCGAAGG CCTCGATCTC
TGGATCGTCG ACGCCTTGCG CTACACGCGC CATCCGAGCC ATTTCAGCCT CAGCGAGACA
TTGGACTGGA TCGCGAGATT GAAGCCGAAA CGGGCGATCC TGACCAATCT CCATACCGAT
CTCGATTTCG CGCGCCTTGC GGCAGAGCTT CCGCCTCACG TGGAGCCGGC CTATGACGGC
ATGCGGATTG TCGGCTGA
 
Protein sequence
MSLAITILGC GSSGGVPRVA QGWGACDPLN PRNRRRRCSI FVEQTGPDGG KTAVLVDTSP 
DLREQLLDLG ATRLDGVLMT HAHADHTHGI DDVRPLVISA RHKINIYMDE TTSAVVRSNF
NYIFVTPPGS QYPPLLTEHR LIPGAPVAVN GPGGPLRATP FRLEHGEIDA LGFRFGDIAY
SPDLNGIPAE SLGYLEGLDL WIVDALRYTR HPSHFSLSET LDWIARLKPK RAILTNLHTD
LDFARLAAEL PPHVEPAYDG MRIVG