Gene Msil_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0486 
Symbol 
ID7091218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp536234 
End bp538450 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content56% 
IMG OID643463816 
Productdiguanylate cyclase 
Protein accessionYP_002360821 
Protein GI217976674 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACT TCTTCAGCAC TCAGATGGAC TTTATATTCT TCTTCTATGG GCTTGCGTTC 
ATCCTTCTCG GCGCAACCTG CTTCGCCATA GCAAAGGGAG ACCGGAAACA GCCCTGGACC
GTGCTGGGAC TGTTTGGCGT TGTTCATGGG GCAAGTGAGT GGCTGGATTT GACCGCGCTG
ATCGTCGGCG ACGCATTTCC ATTCGCCCTT GCGCGAACTG TGTTAATGAC GGTGTCGTTC
TTGCTGTTGA TGGAATTTGC GCGGCTGGAA GCCATTCATT TTGGCCTAAG GCCGCCAGGG
CGCTGGTTGT ATGTCGTATT GGTTCTGTTG GCAGCGTATG GCGGGTTCGC CGGCGGGCTG
AATGTGGCTG GCGTCACTGC GCGCTACGCG ATTGGGCTTG TGGGCTCTCT CGCCGCCAGT
GTCTTATTTG CGCTGCACGC CCGAGGGTTC TCGGGCGCAG CAAGACGCTT TTCAATTCTT
GCCGCGGTGG GATTTGCGCT TTATGGCGTC GCCGCCGGCG CGATTGTCCC GGCCGTTCCA
TTCTGGCCTG CGAGCGTTTT CAACTACGAA TGGTTCATCC ATAACACAGG CGTTCCCATC
CAGCTCGTGC GCGGTGTGCT CGCGTGCTGG ATAGCTCTTT CGATCTGGGC GATTTGGGGA
CAAAAGCTGA TTTTGAAGGT TTCGTCCGAG CGGTTTACAC GGTTTTTACG CAAGCAATTT
GTTTTGACCG CAGGCGCCAT GGCGACGATT CTTGTTCTTG GCTGGCTGCT GACGGAGTTC
CTCGGAGGGA TTTATCAACG AAATGTCCAG GACGAGGCGC GCGGCGATAT CAATCTGCTT
GCGAGCCGAT TCTCTGGCGA GACTGGCGTC GTTGAGGCTG TGGGGAGAAC CTTGGCCGGA
TCGCCGTCCG TGCTTCCTTT GCTGGTCGGC GGCAGCCGAC ATGACCGCGA GGTCGCCCAA
GCCGTTCTGG AGGTTGGCGT CAAGGCGTCA GGAGCCAAGC TCGGCTACAT ATTGGATCTA
ACCGGAGCAA TCGTCGCTGC TTTCGATCCG CGGGACGACT CTGCGTTGCA AGCTCCCGGT
GACGCTTCAA CTTCCCATTT TTCGAAAGCC AATGCGGGAG AACCTATCTC CCATTTTGCA
TTGGATCCTG TGGAGCGCCG GCCTTATTTC TATGCGATCT ACCCGATTCG CCTCGCAAAT
AGCGAGGTGG TCGGCCATGC TGTCCTTAAG AAGTCCCTGA ACGTTCTTGA AGCCGATCTC
AGGGCGTTCG ACCAACCCTA TTTCTTCGTT GATCCTGACG GTCTGATCGT GCTGACGAAT
CAACCGGCGC TTCTTCTCCG CCAATTGTGG CCTCCATCCT CCGACCGGAA ATCTATCCCA
GCGCGACAGA GTCCGACGGT GAATATTGCG CCGCCCTCGA AGCGGGAGAT CGTAGACGCT
ACATGGATTA ATCTCGGTGG AGAGCGCGTG TTCGTCCGCA GGCGCTTCGC GAATGACAGC
GAATGGTCTT TGGTCCTCAC GATCCCGATG GCGGAGTTAT TCGCCAACCG TGTTTTGGGA
ATCGTCATCA CTCTACTGGC GACATTGATG GCGTTGATTT ATCTTTTTGG CAAGGAGCGA
TCAGTCTACG ACAGCGTTCA AATGGACAAG CGCCTCAAAT TGCAAGAATT GGCTCGCAGC
CTTGAATTTC AGGCGAGCAC CGACCCCCTC ACAGGCCTCT TCAATCGCAT GAAATTCGAT
CAGGCGCTGG CGGCCGAGAT ATTAAGGGCG AATCGCTACA ACAGACCGCT TTCTTTGGTG
CTGTTCGACA TTGATCACTT CAAGAATATC AATGATCTCC ACGGTCATCA GGTGGGCGAC
AACGTGCTGG TGCAACTGTC CCGCATAGCT GCGGCGCATA TCAGGGGCAC CGATGTGCTT
GCTCGTTGGG GGGGAGAGGA ATTTGTCATT CTGGTCCCAG AATCCAATGG TCAAATGGCG
TATCAAACTG CAGAAAATCT GAGAAACGCG ATCGGCCAAG CCGTATTCGA GAAGGCCGGG
GCCGTCACCT GTAGTTTCGG GGTTGCTGAA TATGTTGATG GGGATGCCGC GGAATCGCTC
ATCTCTCGCG CGGACGCCGC TATGTACCGC GCCAAGATCA AGGGCCGTAA CCAGGCAGAG
TTGTCTTCTG TGACCGCCCC TTCGTCCGTC GAGACGTCAT TTCCGTCGCC GGCGTAA
 
Protein sequence
MADFFSTQMD FIFFFYGLAF ILLGATCFAI AKGDRKQPWT VLGLFGVVHG ASEWLDLTAL 
IVGDAFPFAL ARTVLMTVSF LLLMEFARLE AIHFGLRPPG RWLYVVLVLL AAYGGFAGGL
NVAGVTARYA IGLVGSLAAS VLFALHARGF SGAARRFSIL AAVGFALYGV AAGAIVPAVP
FWPASVFNYE WFIHNTGVPI QLVRGVLACW IALSIWAIWG QKLILKVSSE RFTRFLRKQF
VLTAGAMATI LVLGWLLTEF LGGIYQRNVQ DEARGDINLL ASRFSGETGV VEAVGRTLAG
SPSVLPLLVG GSRHDREVAQ AVLEVGVKAS GAKLGYILDL TGAIVAAFDP RDDSALQAPG
DASTSHFSKA NAGEPISHFA LDPVERRPYF YAIYPIRLAN SEVVGHAVLK KSLNVLEADL
RAFDQPYFFV DPDGLIVLTN QPALLLRQLW PPSSDRKSIP ARQSPTVNIA PPSKREIVDA
TWINLGGERV FVRRRFANDS EWSLVLTIPM AELFANRVLG IVITLLATLM ALIYLFGKER
SVYDSVQMDK RLKLQELARS LEFQASTDPL TGLFNRMKFD QALAAEILRA NRYNRPLSLV
LFDIDHFKNI NDLHGHQVGD NVLVQLSRIA AAHIRGTDVL ARWGGEEFVI LVPESNGQMA
YQTAENLRNA IGQAVFEKAG AVTCSFGVAE YVDGDAAESL ISRADAAMYR AKIKGRNQAE
LSSVTAPSSV ETSFPSPA