Gene Msil_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0410 
Symbol 
ID7093569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp450455 
End bp451921 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content63% 
IMG OID643463740 
Productbeta-lactamase domain protein 
Protein accessionYP_002360746 
Protein GI217976599 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAGA CGATTATTCC CGCCTATGGC CTGACGCTGG CCCTGACCAT GGCGCTGTCC 
GCGGCGCAAG CCGCCTCCCT GCAGGAAGCG GCCAAGGCGC TCGGGGTCGA CGGCGTCAAA
ACGCTCGAAT TCTCCGGGTC AGGCCGCTGG TTCCAGTTTG GCCAGGCGCC CAATCCAAAC
CTTCCCTGGC CCCAGTTCGA CGTCAGCAGC TACCTTGCCG ACATCAACTA TGACGTCCCG
AGCGCCCGCG TCCAGGTCAC GCGAAAGCAG ACCATCGAAC CCGGCCGGCT GCGGCCGGCG
CCGGTCGAGC AGAAACCCGA TCTCTATGTG AGCGGCGCCC AGGCCTGGAA TGTCGCGCCT
CCGCCGAACT CCCCGCCTGG AACCGCGGCC GTCGCCACGC CCCAGCCCGC GGCCGTCGAG
GAGCGTCTGG CCGAGATCTG GTCGACGCCG CAGGGCTTCC TCAAAGCGGC GTTCGCCAAC
AACGCCAAGT CGGAAGCGAA GGGCGCCGAT GTGGAGGTGT CGTTCACGGT CGGCGGAAAA
TATCACTATA TCGGCGCGAT CAACGCCCGC AATCAGCTGG AGCGCGTGCG CACCTGGATC
GACAATCCGG TGCTTGGCGA CACTTTGGTC GAGACAAGCT TTGGCGGCTA CAAAGACTTC
GGCGGCGTCC AGTTCCCTGC ACGCATCGCG CGGACCCAGG GCGGCCATCC CGTGCTCGAT
CTCGATATCG CTTCAGTGAA GCTGAATCCG CCGGTCGACA TCACGGTTCC CCAGATCGTG
GCGAGCGCTC CGCCGCAGAC CGTCGACGTC AAAAAGCTGG CCGACGGGGT ATTTTATCTC
ACGGGCGGAA CTCACCACAG CGTCGCGATC GAGCAGCGCG ATCATGTCGT GCTTGTCGAA
GCGCCGCTGA ACGAGGAGCG TTCGCGCGCC CTCATTGGCA AGATCGCCGA ACTGGTTCCG
GGCAAACCCA TCAAATATGT CGTCAGCAGC CATCTTCATT TCGACCATTC CGGCGGTCTG
CGCGCCTTTG CTGACGCCGG CGCAACCATT GTGACTCAGG AGCTCGACAA ACCCTATTTC
GAGAAAGCCT GGGCCGCGCC GCGCACGCTG AACCCCGATC TCCTGTCCAA ATCGCAGAAA
GCCGCGACCT TCCAGACTTA CGGCGACAAA TTTGTGCTGA ACGACGGCTC GCGCTCGATC
GAGATTCACA AGATCGCCGG CAGCGGGCAC GCCGACGATA TTTCCCTCAT CTATCTGCCG
GCCGAAAAAA TCCTGATCGA GGCCGATGTC TACACGCCCG CAGCGCCGAA TGCGCCGCGT
CCGACGACGC CCAATCCCTA CAGCGTCAAC CTCTATGACA ACATCCTTCG TCTCAAGCTG
GACGTTGACC AGATCGCTGC GCTGCATGGA CCCGGCGTCG TCAAACTCGC CGATCTGCGA
GCCGCGATCG GCCAGACGAC GAACTGA
 
Protein sequence
MRKTIIPAYG LTLALTMALS AAQAASLQEA AKALGVDGVK TLEFSGSGRW FQFGQAPNPN 
LPWPQFDVSS YLADINYDVP SARVQVTRKQ TIEPGRLRPA PVEQKPDLYV SGAQAWNVAP
PPNSPPGTAA VATPQPAAVE ERLAEIWSTP QGFLKAAFAN NAKSEAKGAD VEVSFTVGGK
YHYIGAINAR NQLERVRTWI DNPVLGDTLV ETSFGGYKDF GGVQFPARIA RTQGGHPVLD
LDIASVKLNP PVDITVPQIV ASAPPQTVDV KKLADGVFYL TGGTHHSVAI EQRDHVVLVE
APLNEERSRA LIGKIAELVP GKPIKYVVSS HLHFDHSGGL RAFADAGATI VTQELDKPYF
EKAWAAPRTL NPDLLSKSQK AATFQTYGDK FVLNDGSRSI EIHKIAGSGH ADDISLIYLP
AEKILIEADV YTPAAPNAPR PTTPNPYSVN LYDNILRLKL DVDQIAALHG PGVVKLADLR
AAIGQTTN