| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0120 |
|---|
| Symbol | |
|---|
| ID | 7090437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 114181 |
|---|
| End bp | 114906 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643463454 |
|---|
| Product | ribose 5-phosphate isomerase |
|---|
| Protein accession | YP_002360464 |
|---|
| Protein GI | 217976317 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0120] Ribose 5-phosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC TAAGCCCCGA TGAGGCCAAA CGCGCCGCGG CCGCCGAGGC GATCAAGCTC
GTCAGGCCCG GCATGAAGCT TGGCCTTGGC ACGGGATCCA CGGCGCGGCA TTTCGTCGAT
CTTCTCGGCG GCCTCGTCGC CGCGGGGCTC GATGTCCTCT GCGTGCCGAC CTCGGAGGAG
ACGCGGGCCC AGGCGGCGGC GCTCGGCGTC GCGCTGACGA CGATCGACGC CGAGCCCGAG
CTCGACCTCA CCGTCGACGG CGCCGACGAG TTCGATGACA GTCTGCGGCT GGTCAAGGGC
GGCGGCGGCG CATTGCTCAG GGAAAAAATC GTCGCCACGG CCTCGAAGAC GATGGTCGTG
ATCGCCGACG TCTCCAAACA TGTGGAGATC ATGGGCAAAT TCCCGCTGCC GGTCGAGGTG
ACCCGGTTTG GCCTCGAGGC GACGCGGCGG CTGATCCGCG CCAGGGCGGA GGAGGCGGGC
TGCGCCGGCG AGATCGTGCT GCGCGACAAG GGCCCCGGTC AGCCTTTCAT CACCGACAAT
GGCAATTTCA TCCTCGACTG CCATTTCGGC GCGCTGCCGC GTCCTGAGCA ATTGGCGCAG
GATCTCAGTG CGATCCCGGG CGTCGTCGAG CACGGCCTCT TCATCGGCCT TGCTAAAGCG
GTGATCTGCG CCGGCCCGGG CGGAATCGAG ATCTTCGGCC GGCTCGAAGC ACAGGCGCCG
CCCTGA
|
|---|
| Protein sequence | MTTLSPDEAK RAAAAEAIKL VRPGMKLGLG TGSTARHFVD LLGGLVAAGL DVLCVPTSEE
TRAQAAALGV ALTTIDAEPE LDLTVDGADE FDDSLRLVKG GGGALLREKI VATASKTMVV
IADVSKHVEI MGKFPLPVEV TRFGLEATRR LIRARAEEAG CAGEIVLRDK GPGQPFITDN
GNFILDCHFG ALPRPEQLAQ DLSAIPGVVE HGLFIGLAKA VICAGPGGIE IFGRLEAQAP
P
|
|---|
| |