Gene Msil_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0003 
Symbol 
ID7092331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2452 
End bp3081 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID643463338 
ProductHolliday junction DNA helicase RuvA 
Protein accessionYP_002360350 
Protein GI217976203 
COG category[L] Replication, recombination and repair 
COG ID[COG0632] Holliday junction resolvasome, DNA-binding subunit 
TIGRFAM ID[TIGR00084] Holliday junction DNA helicase, RuvA subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCA AGCTGAAAGG CCTCGTCGAT TCGCAAGGCG AAGATTACGT CATTCTCGAC 
GTCAATGGCG TCGGCTATGT GGTGCATTGC TCGTCGCGCA CCCTGCAAAA CCTGCCGCCG
CAGGGACAGG CGACGGCGCT GGCGATCGAT ACGCAGATGC GCGAGGATTC AATTAAACTC
TACGGTTTTG CGTCGGAGAC CGAGCGGGAG TGGTTTCGCC TTCTGCAATC GGTGCAGGGC
GTCGGCGCCA AGGTGGCGCT GGCGATCCAG GGCGTGCTGC GTCCGGGCGA GATCGTGACC
GCGATCGCGG CTCAGGACCG GGCGGCTTTC GCCCGAGCTT CGGGTGTCGG CGCCAAACTG
GCCGCGCGCA TTCTCGCGGA ATTGAAGGAC AAGGCGCCGG CATTGGGCGC CTCGCTCCAC
ACTCTTGCGG GGGCGGGGAG CGAGGGGGCC GGCGTCGAGG CGCCCGCATC CGGTGCGGTC
TCGGACGCGA TCTCGGTGCT GGTCAACCTC GGCTTCGGCC GGTCGCAAGC GGCGGTCGCG
GTCGCCGCCT CCAGCAAAGC GCTGGGGTCG GGCGCCGGCG CTGGCGATCT CGCCAAGCGC
GCGCTGCAGG AGCTGGCGCA ATCGGGCTAA
 
Protein sequence
MIGKLKGLVD SQGEDYVILD VNGVGYVVHC SSRTLQNLPP QGQATALAID TQMREDSIKL 
YGFASETERE WFRLLQSVQG VGAKVALAIQ GVLRPGEIVT AIAAQDRAAF ARASGVGAKL
AARILAELKD KAPALGASLH TLAGAGSEGA GVEAPASGAV SDAISVLVNL GFGRSQAAVA
VAASSKALGS GAGAGDLAKR ALQELAQSG