Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4158 |
Symbol | |
ID | 7088481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4937715 |
End bp | 4938458 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643463037 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_002360052 |
Protein GI | 217975301 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAAGT TTCTGCTGTT CCTGATTTTA ACTATGAGTG CCTTTGTTTC GGCTGCAAAC CAAGATGTTC TTATCGGTAG CGGAGAATGG TCTCCGTATG CTGGCGCTAA ATTGAAAGGA TTGGGTTTTT TAAACGATGT GGTCACAATC GCTTTTGAGC AGGAAGGAAT TACCGCAAAA TTCGAGTTCA AACCTTGGGC TCGTATTGAA GTCGAAACCG GTAATGGGTA TTTTCTCGCG TCACCCGGTT GGTCCATTCA AGAAGATCGT AAAGCCCAAT ATCTGTTCAG TAAGAAACCG ATAATCGTTT CTCGCAGCGT ATTTATTGAA CGAATTGGTA GTCAGTTTGA CTGGAAGATC ATGAGTGATC TTAAACAATT TACTATCGGG AGCAACCGAG CCGATTACTA TGTTAAAGCA CTGACTGAGA TAGGAGTTAA AGTTCAAGAG TTAAACGAAT ACCCACAGGG AATCAAGATG CTACTTGCTA AACGTTTTGA CGCGTTCATT GTAAATGAAG CCGTGGGGCT GAAACTGATA CGCGATTTAT CTGCTGAAGA ACAAGCTAAA ATTCAAATTC ACCCTTTAGC GTATGATGAA AATTTCTCCT TCCTCATGTT TTCTAAAAAT TACCCTAATG TCGAAGCTTT TGTCGAAAAG TATGATTCTG GCTTTGAAAA AATACAGAAA TCAGGGCTAT ATCAAACAAT GGTTCAAGAT TTATATAAAG GTAAATATGA TTGA
|
Protein sequence | MSKFLLFLIL TMSAFVSAAN QDVLIGSGEW SPYAGAKLKG LGFLNDVVTI AFEQEGITAK FEFKPWARIE VETGNGYFLA SPGWSIQEDR KAQYLFSKKP IIVSRSVFIE RIGSQFDWKI MSDLKQFTIG SNRADYYVKA LTEIGVKVQE LNEYPQGIKM LLAKRFDAFI VNEAVGLKLI RDLSAEEQAK IQIHPLAYDE NFSFLMFSKN YPNVEAFVEK YDSGFEKIQK SGLYQTMVQD LYKGKYD
|
| |