Gene Sbal223_4158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4158 
Symbol 
ID7088481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4937715 
End bp4938458 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content39% 
IMG OID643463037 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002360052 
Protein GI217975301 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGT TTCTGCTGTT CCTGATTTTA ACTATGAGTG CCTTTGTTTC GGCTGCAAAC 
CAAGATGTTC TTATCGGTAG CGGAGAATGG TCTCCGTATG CTGGCGCTAA ATTGAAAGGA
TTGGGTTTTT TAAACGATGT GGTCACAATC GCTTTTGAGC AGGAAGGAAT TACCGCAAAA
TTCGAGTTCA AACCTTGGGC TCGTATTGAA GTCGAAACCG GTAATGGGTA TTTTCTCGCG
TCACCCGGTT GGTCCATTCA AGAAGATCGT AAAGCCCAAT ATCTGTTCAG TAAGAAACCG
ATAATCGTTT CTCGCAGCGT ATTTATTGAA CGAATTGGTA GTCAGTTTGA CTGGAAGATC
ATGAGTGATC TTAAACAATT TACTATCGGG AGCAACCGAG CCGATTACTA TGTTAAAGCA
CTGACTGAGA TAGGAGTTAA AGTTCAAGAG TTAAACGAAT ACCCACAGGG AATCAAGATG
CTACTTGCTA AACGTTTTGA CGCGTTCATT GTAAATGAAG CCGTGGGGCT GAAACTGATA
CGCGATTTAT CTGCTGAAGA ACAAGCTAAA ATTCAAATTC ACCCTTTAGC GTATGATGAA
AATTTCTCCT TCCTCATGTT TTCTAAAAAT TACCCTAATG TCGAAGCTTT TGTCGAAAAG
TATGATTCTG GCTTTGAAAA AATACAGAAA TCAGGGCTAT ATCAAACAAT GGTTCAAGAT
TTATATAAAG GTAAATATGA TTGA
 
Protein sequence
MSKFLLFLIL TMSAFVSAAN QDVLIGSGEW SPYAGAKLKG LGFLNDVVTI AFEQEGITAK 
FEFKPWARIE VETGNGYFLA SPGWSIQEDR KAQYLFSKKP IIVSRSVFIE RIGSQFDWKI
MSDLKQFTIG SNRADYYVKA LTEIGVKVQE LNEYPQGIKM LLAKRFDAFI VNEAVGLKLI
RDLSAEEQAK IQIHPLAYDE NFSFLMFSKN YPNVEAFVEK YDSGFEKIQK SGLYQTMVQD
LYKGKYD