| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3792 |
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| Symbol | |
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| ID | 7087456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 4496385 |
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| End bp | 4497707 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643462671 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002359692 |
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| Protein GI | 217974941 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAC ATAATCACTT TAACGCTATC AAGTCTTATC CAATTGTAAT GTCAGAAACT
GCTGCACCTG ACATCATTAC GTCTCAAATC ACAGCACCTG AAATCATTGC GCCTCAAATC
ACAGTACCTG CAAAGCGGCA GTTCACGCTG TCGACACTCG CCCTCGCATT ATGTGTGCTC
GGCTCTGCTG CGCTTTTCAC CGCCCAACCT TCATGGGCAG GGGACGATCA CGGTTCAGCT
ACTCAAACTG AGCAAGCGGA TGAACACGGT GCACAGGCGC TTAAGTTGAC CCAAGTGCAG
CAAGCATTGG CGGGCATTAG CTTGTTACCC CTGTCGAGCG ATAGCTTGAA TATCGCCAAT
TTGAATCTGG ATATCAGGGC GACGGCAACC TTAGTGGTGG ATCGCGATAG AACTGCCACC
CTTGCACCAC AGCTCGATGT GCGCGTGTTG GCGCGCCACG TGGTGCCGGG ACAAGAAGTC
AAAAAAGGTG AGCCTTTACT GACCTTGGGC GGCTCAGCCG TTGCGCAGGC ACAGGCGGAT
TACATCAATG CCGCCGCAGA ATGGAGCCGA GTTAAGCGCA TGAGCGAAGG CGCCGTGAGT
GTCAGCCGCC GTATGCAGGC GCAGGTGGAT GCCGAACTTA AACGCGCGAT TTTAGAGGCG
ATTAAGATGA CGCAAGCACA AATTCGCGCA CTGGAATTGA CGCCCGAAGC CATCGGCAGT
TATCAACTTT TAGCGCCGAT TGACGGACGA GTGCAGCAAG ATATCGCCAT GTTAGGCCAA
GTATTTAGTG CGGGCACGCC GTTAATGCAG CTGACCGACG AGTCTTATTT ATGGGTTGAG
GCGCAGTTAA CGCCCACCCA AACCGCGCAT ATCACTGTCG GCAGTGCGGC CTTAGTGCAA
GTGGGGGATA AAACGCTGGC GGGCAAGATC ATAGGCCGCT CCCATGAACT CGATAGCGTG
ACGCGCACCG AGCAAGTACT GGTGAGTATG CCCAATCCTG ATCATGTGCT GCATGCGGGG
CAATTTGCCG AACTCTACTT TGCCAATACT GTCGCCAACT CTGCTGATCA GGCTGGTGGA
ATCGTGTTGC CCGATGCGGC GCTCACCCGC AGCGGCGATG GCGACTGGCA GATTTTTATT
CAAGATGAAG ATGGCTTCGA GTCCATTGAG GTAGAAGTGG TGCAGCGTCA GCGCGGCTTG
AGTTTAGTGC GCGGCGCTGA GCTTGAAAAA GCCCAGCAGG CACAGCTCAA GGTGGTGGTG
GCTGGTGCAT TTTTCTTGGC GTCCGAGCAG GCGAAAGCAG GCTTTGATAT CCATAACCAT
TAA
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| Protein sequence | MNSHNHFNAI KSYPIVMSET AAPDIITSQI TAPEIIAPQI TVPAKRQFTL STLALALCVL
GSAALFTAQP SWAGDDHGSA TQTEQADEHG AQALKLTQVQ QALAGISLLP LSSDSLNIAN
LNLDIRATAT LVVDRDRTAT LAPQLDVRVL ARHVVPGQEV KKGEPLLTLG GSAVAQAQAD
YINAAAEWSR VKRMSEGAVS VSRRMQAQVD AELKRAILEA IKMTQAQIRA LELTPEAIGS
YQLLAPIDGR VQQDIAMLGQ VFSAGTPLMQ LTDESYLWVE AQLTPTQTAH ITVGSAALVQ
VGDKTLAGKI IGRSHELDSV TRTEQVLVSM PNPDHVLHAG QFAELYFANT VANSADQAGG
IVLPDAALTR SGDGDWQIFI QDEDGFESIE VEVVQRQRGL SLVRGAELEK AQQAQLKVVV
AGAFFLASEQ AKAGFDIHNH
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