Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3367 |
Symbol | |
ID | 7087193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3991392 |
End bp | 3993446 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643462253 |
Product | TonB-dependent receptor |
Protein accession | YP_002359274 |
Protein GI | 217974523 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.238056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTAGTC GTTACTTCAC AGTATCACTC TGTGCAATTT CTGTATCTCT TGCCTGTTCT AACACAACGT TCGCCGATGA TTTCCACAGT CAAATGCTGG AACTGAACCA GCTCAATGAC ACATTCCACT CCACTGCTGA CAGTTTAGCG TTGGGCCAGT TAACGGCTTT GATGGTTTTA CCTGCGGATC TTAACGGAAA TCCAGCAAGC ATTAGTATGC GCAGCGCGAG TCAAGGCGTG GCCGTATTGC AAGATAGAGT GTATTTCTCA CCTGCGCCTT ATTCTGCACC GCAATTACAA CTATTACCCA ATCTACTGCA ACAACAGAGT GTCACTGTCA CGCCAATGGC GAATATGGCG GTTGGTGGGC AAGGGGCGTT TGGGGTGGTG AGTTATCAAA CCTTACCTGT AGCCGAGCAA GCGGAAAACT GTAAGGTAAC GCTCGAAGGC AATACGGATG CTGACTACAG TGTCGATGTG AATTGGGGCG TGAAGCAAAA AGAATACGGC ATGATACTCG CGGTTAACTA CAGTGATGGT AGCGGTGCAG ATCACTTACT CAATGGTCAA GATACTGACC GCCAAACCAC TGATATCTTA TTTAAAATCA ATGCTGCGAG TTTATTAGGT GCCCGAAGTC CACAGGTGAC TGAGTTTACC TACCAGTTCC TCGATGATGA TAGCTATCGC TCCCAACTCG GCTTAACGCA GGCCGATTGG CAACAAGACC CGATGAGTTT GTATTCGGCC ACGGCTGGAG ATAAGCATCA AGGGCGACAC CATAAGTATC AACTATCGCA CCAAGTTGCG CTTAGTGGTG GGCATAAGGT CATCACTGAC TTTTACTATC AATCCTATTC TCAGCAATTA AATCAACTAA ATCAATTTGA TGGGAAAATG CTCGATACCC AGAGTTTAGC AGCGCTGGCC GCATTTGAAC GGCAGCCGAC AGTCGATGGC GTCGCGGTCG CCTCGTTACA ACAAGACAAT GATTTCAGCT CCTTTGGGGT ACAAACTGAA TCGGTGAATC AGTATGGCGC TCATCAAATT AGCTATAGTG CCCGTTACTA TACGGATAAA GCCGAGATGC ACCTTGGCGA TCAGCAGAGT CTATGGCAGC AGGACTTGAG TGTAGTGAGT GATGTACCCA ATGCGCTGTT GGCTTATACC GATGATGCGA CCGCATTCAC CTCGGCCATC GATTCCTTGT TTAATTGGGA CGGATTGCAG CTCAAACTCG CGCTCGCCTA TGAAAAAGTG GACGTCAATC GCAAGGTCAA TTTAGCCTAC GCCGGACTCG AAGCGGCAGA TTTTTCCGAC AGCGATTGGA TGCCACAACT TGGCGTTTTA TATCATGCTG GAGATTGGCG CTTTAGTACG GATATTCGAC GTTCATGGAC CGCCGCGAGT GCGGGGAATC TTGAGCAAGA GGCACAAGTG TCGCTGCAAT ATCAAGTCAG CGCCCAATAT GTCAGCGAGC GTTTTAGTGC AGACATCAAA ACCTATGTCC AAGATTTTGA TAATCTGCAT GTCAATTGCG ATGCGTATAC CCAATGTGCC GACAGTCGAT TGTGGGTTCA AGGCAATGTC GTGGATGTGC TGACCAAAGG AGTTGAGCTG AATCTTGGCT ATCAGTGGGA ACTGGGCAGC GTGCAGTTAC CTTTAGCCTT GAATTATCAG TATTCGAATG CTGAGTATCA AACCAATAGC TGCAATGAAA TCCAAGGCTG CGTCGTGGCT GGCGATAGGG TGGCTTGGTT ACCCAAGCAG CAACTGCAGT TGAGTGCAGG GATGAAATAT GACGAATATG AACTGCATGC GAATGTCTTT TATCAATCGA AGCGCGAAAT GGGCCAATTT GGCGCCGAAT TACAGCCTGT CGCCGCACAA TGGCGGGTAG ATTTAGCGGC GAATTATCAT TTTAACCGTC ACCATGAGAT TTATTTTCGG ATAGAAAACC TCTTAGATGA GACATTAGTC ACAACAGCAT CAAATAGCGG AATTCGATCG GAAAATGGAC GTATTAGCTA TTTAGGTTAT CAATGGCGCT TTTAA
|
Protein sequence | MPSRYFTVSL CAISVSLACS NTTFADDFHS QMLELNQLND TFHSTADSLA LGQLTALMVL PADLNGNPAS ISMRSASQGV AVLQDRVYFS PAPYSAPQLQ LLPNLLQQQS VTVTPMANMA VGGQGAFGVV SYQTLPVAEQ AENCKVTLEG NTDADYSVDV NWGVKQKEYG MILAVNYSDG SGADHLLNGQ DTDRQTTDIL FKINAASLLG ARSPQVTEFT YQFLDDDSYR SQLGLTQADW QQDPMSLYSA TAGDKHQGRH HKYQLSHQVA LSGGHKVITD FYYQSYSQQL NQLNQFDGKM LDTQSLAALA AFERQPTVDG VAVASLQQDN DFSSFGVQTE SVNQYGAHQI SYSARYYTDK AEMHLGDQQS LWQQDLSVVS DVPNALLAYT DDATAFTSAI DSLFNWDGLQ LKLALAYEKV DVNRKVNLAY AGLEAADFSD SDWMPQLGVL YHAGDWRFST DIRRSWTAAS AGNLEQEAQV SLQYQVSAQY VSERFSADIK TYVQDFDNLH VNCDAYTQCA DSRLWVQGNV VDVLTKGVEL NLGYQWELGS VQLPLALNYQ YSNAEYQTNS CNEIQGCVVA GDRVAWLPKQ QLQLSAGMKY DEYELHANVF YQSKREMGQF GAELQPVAAQ WRVDLAANYH FNRHHEIYFR IENLLDETLV TTASNSGIRS ENGRISYLGY QWRF
|
| |