Gene Sbal223_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3249 
Symbol 
ID7087627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3855239 
End bp3855775 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content41% 
IMG OID643462132 
ProductHemerythrin HHE cation binding domain protein 
Protein accessionYP_002359156 
Protein GI217974405 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.890516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00150235 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTAAAA GACTCATGCA TGATCATAAA CATATAGCTG TATTGCTAAA TGTTTTAAAA 
AACAAGCAGA TGAAACTGTC AGAAGGTGAG TCAATCAACT TCATCGTGGT GCGTGATATC
GTTGAATATA TGCAAGGATA TGCTGAGCGT TGCCATCATC CGGTTGAAGA CATTATTTAT
GCCTACTATC TTGCGCATAA AGCTAATGAC AGTATCGATA AGTTGAGTGC CGAACACGAG
TTAGTGATCC AAGCCTCGGC GGCTTTGATG ACGACGTTGA ATCTGATCCT CAGTGATATT
GTGGTTGCCC GTGAGAAACT GATTGTTGAT TTTGCAGATT ATGTCGCATT ACAAGAGCGG
CATATGCAAA TGGAGGAGCG GGAAATATTT CCTCTGTTAG CTAAAACCTT AACTGAACAA
GATTGGCAAC TGATAGAGTC TGAGTGTCAG AAATCCTTGA TTGATGATCC TTTGTTCTTA
GATCGCGAGC AGAAAGAATT TGAGGATTTA CGGGCTTATC TAACAATGGC TGACTAG
 
Protein sequence
MLKRLMHDHK HIAVLLNVLK NKQMKLSEGE SINFIVVRDI VEYMQGYAER CHHPVEDIIY 
AYYLAHKAND SIDKLSAEHE LVIQASAALM TTLNLILSDI VVAREKLIVD FADYVALQER
HMQMEEREIF PLLAKTLTEQ DWQLIESECQ KSLIDDPLFL DREQKEFEDL RAYLTMAD